LOCUS BC080607 1890 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens transmembrane protein 185B (pseudogene), mRNA (cDNA
clone IMAGE:5471378).
ACCESSION BC080607
VERSION BC080607.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: g Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..1890
/db_xref="H-InvDB:HIT000265873"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5471378"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 380 a 538 c 509 g 463 t
ORIGIN
1 cgcctggaag cgtccgccca aggtcgcggg ccgcttgggg agtcagcagc gcgccaggcc
61 ccttcgggcc ccacacgcat taggtgcctt cttgatgggt acggagtgaa cgcgggcggc
121 ggcgggaccg aggcagcgcc cagtttgtaa ccgccgcgcc gcccgtgccc gcgcgcgcca
181 caccccagcg cgcttccggc cgggccacgt gaccgcgcgt gcacgtgttc cggcctctcc
241 gcttcgccgc tccgaacctc ctcctggtcg tcccggcatt cgtccacgcg gagccggctt
301 gggcggggcc cgggaggcgg cggccggaga agccgcggag acgcgagcgc cgagcgtcgc
361 gagggagcag gcccgggcag gcaagcggcg gcctccgcca tgaaccccag gggcctgttc
421 caggacttca accccagtaa gtttctcatc tacacctgcc tgctgctctt ctcggtgctg
481 ctgcccctcc gcctggacgg catcatccaa tggagctact ggggcgtctt tgcccccata
541 tggctgtgga agcttctagt cgtcgcaggc gcctccgtgg gcgcgggcgt ttgggcccgc
601 aaccctcgct accgcaccga gggagaggcc tgtgtggagt tcaaagccat gctgatcgct
661 gtgggcatcc acctgctgct gctcatgttc gaagtcctgg tctgcgacag ggtggagagg
721 ggcacccact tctggctgct ggtcttcatg cctctcttct tcgtgtcccc cgtgtccgtg
781 gctgcctgcg tctggggctt tcgacacgat aggtcgctgg agctggagat cctgtgctcg
841 gtcaacatcc tgcagttcat cttcatcgcc ctaaagctgg acaggattat tcactggccg
901 tggctggtgg tgtttgtgcc cctgtggatc ctcatgtcgt tcctttgcct ggtcgtcctc
961 tattacatcg tctggtccct cctgttcctg cggtccctgg atgtggttgc cgagcagcgg
1021 agaacacacg tgaccatggc tatcagttgg ataacgattg tcgtgcctct gctcactttt
1081 gaggtcctgc tggttcacag attggatggc cacaatacat tctcctacgt ctccatattt
1141 gtcccccttt ggctttcctt actaacttta atggccacaa catttaggcg aaaggggggc
1201 aatcattggt ggtttggcat tcgcagagac ttctgtcagt ttctgcttga aattttccca
1261 tttttaagag aatatgggaa catttcatat gatctccatc acgaagatag tgaagatgct
1321 gaagaaacat cagttccaga agctccgaaa attgctccaa tatttggaaa gaaggccaga
1381 gtagttataa cccagagccc tgggaaatac gttccccccc ctcccaagtt aaatattgat
1441 atgccagatt aaactcctag agaggaccca ggcacacaca gactccactt ggccttcgcc
1501 tcttgttcat tcatcccaaa cctggaaatg gaaacaggct tcaaacactc gtctcacgcc
1561 gtgtttgaga tcaccgcctc atcagtatgc atcatagatg gaggtggttt cagtatgtgg
1621 gtgtgtgtgg tgtgtacctg ggtaagagac ttgctttcca ggttcgcact ttcaggtgta
1681 gctgggggca gtaagtcgaa ttgttttagt aggtcctcaa aaggaataac cacacagctg
1741 tttgtttaaa tgctactgta cctatcaaaa ctattgttta aaaagtattt ttatacactg
1801 ctaatctaaa attgtatttc agattgtgcc tgtcataaca atagcaaatg taaaaagttc
1861 tctttcccac caaaaaaaaa aaaaaaaaaa
//