LOCUS BC080600 1725 bp mRNA linear HUM 08-FEB-2007 DEFINITION Homo sapiens FCF1 small subunit (SSU) processome component homolog (S. cerevisiae), mRNA (cDNA clone MGC:99629 IMAGE:4889846), complete cds. ACCESSION BC080600 VERSION BC080600.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1725) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1725) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: e Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46255018. FEATURES Location/Qualifiers source 1..1725 /db_xref="H-InvDB:HIT000265866" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:99629 IMAGE:4889846" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1725 /gene="FCF1" /gene_synonym="Bka" /gene_synonym="CGI-35" /db_xref="GeneID:51077" /db_xref="HGNC:HGNC:20220" CDS 279..608 /gene="FCF1" /gene_synonym="Bka" /gene_synonym="CGI-35" /codon_start=1 /product="FCF1 protein" /protein_id="AAH80600.1" /db_xref="GeneID:51077" /db_xref="HGNC:HGNC:20220" /translation="MMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLP CTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPD DYGAPRF" BASE COUNT 559 a 310 c 348 g 508 t ORIGIN 1 ggagtttggc gtgaccatgg ggaagcaaaa gaaaacaagg aagtatgcga ccatgaagcg 61 aatgcttagt ctcagagatc agaggctaaa aggatagatt aaaacctaaa aagaaagaaa 121 agaaggatcc cagcgcatta aaggaaagag aagttcccca acacccttcc tgcttatttt 181 tccaatataa tacacagctg ggcccacctt accacatcct cgttgatacc aactttatca 241 acttttccat aaaagccaaa ctggacttag tgcagtcaat gatggactgt ctgtatgcca 301 agtgtatccc atgtataacc gattgtgtaa tggctgaaat tgagaaattg gggcagaagt 361 atcgagtggc tctaaggatt gccaaggatc caagatttga acgattacca tgtacacaca 421 aaggaaccta tgcagatgac tgcttagtac agagagtaac tcagcataag tgttacattg 481 tggccacagt tgaccgggac ctgaaaagaa gaatccgtaa gattcctgga gttcctatca 541 tgtacatttc taaccataga tacaacattg aacggatgcc agatgattat ggagcccctc 601 gattctaatt cttacaagac acagttcctc tgcctttctt cgaccaactt tctcttgttg 661 ccagttcatt acacaaaatg tagcgggatt tttaaggaat cagagagact gatggagttc 721 agggagatat ttattattta ggtgcaccag cccagtcaga ttaacatcca aaggactgaa 781 ccctgaacag agttaagtta ccttttaagc attttgtggg gccgcggggg ttggggggaa 841 tctgtgcagg gggaagcata ttacagaagc aagaaagaca gttattcaat taactgagac 901 atgcattaca tcatttctta cttttcaagg aaaatcatgt tttacgactt gagtttatct 961 gtctagttac cttgcagctg cacagctaga gaaacagggt atttacaatg cctgggaaag 1021 gaggagagat aaggctcact agccacagaa aaacaggcag ttaattttta aaggactcca 1081 gctctttctc tttctcacgg ggaattggat tttcttacat gcaactgaat ttctgcttac 1141 acatttttaa atttctttta attgcttttc caatgcaata gcatgaatta ttattctgtt 1201 gacctatttg ccttactatg agctgaggca ggagaacctc ttgaacccag gaggtggagg 1261 ttgcagtgag ctgagattgc gccactgcat tccagcctgg gtgacagagt gagactgtct 1321 caaaaaaaaa aaaaaaatta atgatggtca aagggtataa aatctcagac aggaagaata 1381 tgttttatgc tttttttgag ttctgttgta cagtgtggtg cctatactta ataatggggt 1441 attatacatt tcaaaattga tgttctcatc acagaaatgt atttgaagta ttgcatatgt 1501 taactagctt gatttaacta ttccatattg tatccacaat ttatgatatc actttgtaac 1561 ccatacattt atacaattat aaattgtcaa tttacaataa aaaatttttg ttgcgtcttt 1621 ttagaaatca gatattctga tgattgctca cataatttgg cggtcattgt tttatactga 1681 cttactcaat aaacatttat taaatgtaaa aaaaaaaaaa aaaaa //