LOCUS BC080600 1725 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens FCF1 small subunit (SSU) processome component homolog
(S. cerevisiae), mRNA (cDNA clone MGC:99629 IMAGE:4889846),
complete cds.
ACCESSION BC080600
VERSION BC080600.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: e Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46255018.
FEATURES Location/Qualifiers
source 1..1725
/db_xref="H-InvDB:HIT000265866"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:99629 IMAGE:4889846"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1725
/gene="FCF1"
/gene_synonym="Bka"
/gene_synonym="CGI-35"
/db_xref="GeneID:51077"
/db_xref="HGNC:HGNC:20220"
CDS 279..608
/gene="FCF1"
/gene_synonym="Bka"
/gene_synonym="CGI-35"
/codon_start=1
/product="FCF1 protein"
/protein_id="AAH80600.1"
/db_xref="GeneID:51077"
/db_xref="HGNC:HGNC:20220"
/translation="MMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLP
CTHKGTYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPD
DYGAPRF"
BASE COUNT 559 a 310 c 348 g 508 t
ORIGIN
1 ggagtttggc gtgaccatgg ggaagcaaaa gaaaacaagg aagtatgcga ccatgaagcg
61 aatgcttagt ctcagagatc agaggctaaa aggatagatt aaaacctaaa aagaaagaaa
121 agaaggatcc cagcgcatta aaggaaagag aagttcccca acacccttcc tgcttatttt
181 tccaatataa tacacagctg ggcccacctt accacatcct cgttgatacc aactttatca
241 acttttccat aaaagccaaa ctggacttag tgcagtcaat gatggactgt ctgtatgcca
301 agtgtatccc atgtataacc gattgtgtaa tggctgaaat tgagaaattg gggcagaagt
361 atcgagtggc tctaaggatt gccaaggatc caagatttga acgattacca tgtacacaca
421 aaggaaccta tgcagatgac tgcttagtac agagagtaac tcagcataag tgttacattg
481 tggccacagt tgaccgggac ctgaaaagaa gaatccgtaa gattcctgga gttcctatca
541 tgtacatttc taaccataga tacaacattg aacggatgcc agatgattat ggagcccctc
601 gattctaatt cttacaagac acagttcctc tgcctttctt cgaccaactt tctcttgttg
661 ccagttcatt acacaaaatg tagcgggatt tttaaggaat cagagagact gatggagttc
721 agggagatat ttattattta ggtgcaccag cccagtcaga ttaacatcca aaggactgaa
781 ccctgaacag agttaagtta ccttttaagc attttgtggg gccgcggggg ttggggggaa
841 tctgtgcagg gggaagcata ttacagaagc aagaaagaca gttattcaat taactgagac
901 atgcattaca tcatttctta cttttcaagg aaaatcatgt tttacgactt gagtttatct
961 gtctagttac cttgcagctg cacagctaga gaaacagggt atttacaatg cctgggaaag
1021 gaggagagat aaggctcact agccacagaa aaacaggcag ttaattttta aaggactcca
1081 gctctttctc tttctcacgg ggaattggat tttcttacat gcaactgaat ttctgcttac
1141 acatttttaa atttctttta attgcttttc caatgcaata gcatgaatta ttattctgtt
1201 gacctatttg ccttactatg agctgaggca ggagaacctc ttgaacccag gaggtggagg
1261 ttgcagtgag ctgagattgc gccactgcat tccagcctgg gtgacagagt gagactgtct
1321 caaaaaaaaa aaaaaaatta atgatggtca aagggtataa aatctcagac aggaagaata
1381 tgttttatgc tttttttgag ttctgttgta cagtgtggtg cctatactta ataatggggt
1441 attatacatt tcaaaattga tgttctcatc acagaaatgt atttgaagta ttgcatatgt
1501 taactagctt gatttaacta ttccatattg tatccacaat ttatgatatc actttgtaac
1561 ccatacattt atacaattat aaattgtcaa tttacaataa aaaatttttg ttgcgtcttt
1621 ttagaaatca gatattctga tgattgctca cataatttgg cggtcattgt tttatactga
1681 cttactcaat aaacatttat taaatgtaaa aaaaaaaaaa aaaaa
//