LOCUS BC080598 1726 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens PHD finger protein 20, mRNA (cDNA clone
IMAGE:4875346), partial cds.
ACCESSION BC080598
VERSION BC080598.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1726)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: e Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40804464.
FEATURES Location/Qualifiers
source 1..1726
/db_xref="H-InvDB:HIT000265864"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4875346"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1726
/gene="PHF20"
/gene_synonym="C20orf104"
/gene_synonym="GLEA2"
/gene_synonym="HCA58"
/gene_synonym="NZF"
/gene_synonym="TZP"
/db_xref="GeneID:51230"
CDS 76..>1726
/gene="PHF20"
/gene_synonym="C20orf104"
/gene_synonym="GLEA2"
/gene_synonym="HCA58"
/gene_synonym="NZF"
/gene_synonym="TZP"
/codon_start=1
/product="PHF20 protein"
/protein_id="AAH80598.1"
/db_xref="GeneID:51230"
/translation="MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVL
IHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEDGSSEFQINEQVLACWSDCRF
YPAKVTAVNKDGTYTVKFYDGVVQTVKHIHVKAFSKDQNIVGNARPKETDHKSLSSSP
DKREKFKEQRKATVNVKKDKEDKPLKTEKRPKQPDKEGKLICSEKGKVSEKSLPKNEK
EDKENISENDREYSGDAQVDKKPENDIVKSPQENLREPKRKRGRPPSIAPTAVDSNSQ
TLQPITLELRRRKISKGCEVPLKRPRLDKNSSQEKSKNYSENTDKDLSRRRSSRLSTN
GTHEILDPDLVVSDLVDTDPLQDTLSSTKESEEGQLKFALEAGQVSSALTCHSFGDGS
GAAGLELNCPSMGENTMKTEPTSPLVELQEISTVEVTNTFKKTDDFGSSNAPAVDLDH
KFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSLEPEESPGKRHVQTRGPSASDKPSQE
TLTRKRVSASSPTTKDKEKNKEKKFKEFVRVKPKKKKKKKKK"
BASE COUNT 599 a 339 c 414 g 374 t
ORIGIN
1 gtcggttggt cctggagcgg cgcagccgga gtggggccgt gaggagaata aaggcagccc
61 cgttgatgac tgaaaatgac aaagcatcca cctaacagac gaggaatcag ctttgaagtg
121 ggagcccagt tggaagcccg ggaccgttta aaaaactggt atccagctca catagaagac
181 attgactacg aggaaggaaa agtactcatc catttcaagc gttggaacca tcgttatgat
241 gagtggttct gctgggacag tccttattta cgccctttag agaaaataca gctgaggaaa
301 gagggcttgc atgaagagga tggatcttct gaatttcaaa taaatgagca ggtccttgct
361 tgctggtctg attgtcgttt ttacccggcc aaagtcactg ctgttaacaa ggatggtact
421 tacactgtga aattttatga tggagtagtt cagactgtca aacatattca tgtcaaagct
481 ttttccaaag atcagaatat tgtgggtaat gctaggccta aagaaacaga tcacaaaagt
541 ctttcatcat ctcctgataa acgagagaag tttaaagaac agagaaaagc aacagtgaat
601 gtgaagaaag acaaagaaga taaaccctta aagacagaaa agcgacccaa gcagcctgat
661 aaagaaggaa agttaatctg ttctgaaaag gggaaagtgt cagagaaaag tcttcccaag
721 aacgagaagg aagacaagga aaacatttcc gaaaatgaca gagagtattc tggagatgcc
781 caagtggata agaaacctga aaatgacatt gtgaagagtc cacaagaaaa cttgagggaa
841 cccaaaagaa aacgaggcag acccccttcc atagctccta ctgctgtgga ttcaaactct
901 caaactttgc aaccaataac attggaactg agaagaagga aaatatcaaa aggatgtgaa
961 gtcccattaa aacgtcctcg gcttgacaaa aattcatccc aggaaaagtc aaaaaactac
1021 tcggaaaaca ctgacaaaga cttatcgagg agacgttcct ccaggctgtc cactaatggg
1081 acccatgaga tcctagatcc tgacttggtt gtatcagatt tggttgatac ggatcctttg
1141 caagacacgt tgtctagtac caaggaatct gaagaaggtc agttgaagtt tgctttggaa
1201 gctggccagg tctcatctgc actgacttgc cactcctttg gggatggatc cggggctgca
1261 ggcttggagt tgaactgccc atcaatggga gaaaacacga tgaaaacaga accgacttct
1321 ccccttgtgg aattacaaga gatttcgact gtggaagtaa caaatacttt taagaaaaca
1381 gatgattttg ggtcatctaa tgcaccagct gtcgacctag accataagtt tagatgcaaa
1441 gttgtggact gtttaaaatt tttccgcaaa gccaaactgt tgcactatca catgaagtat
1501 ttccatggaa tggagaagtc actggagcca gaagagagcc cgggaaagag gcatgtccaa
1561 accaggggcc cttcagcttc agacaagccc agccaggaga ccctgaccag gaagcgggtc
1621 tctgccagtt ccccaactac aaaagacaag gaaaagaata aagagaagaa attcaaggag
1681 tttgtgagag tgaagccaaa gaagaaaaaa aaaaaaaaaa aaaaaa
//