LOCUS BC080596 2891 bp mRNA linear HUM 02-JUL-2005 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 10-like, mRNA (cDNA clone IMAGE:4589063), partial cds. ACCESSION BC080596 VERSION BC080596.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2891) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2891) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: c Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33354274. FEATURES Location/Qualifiers source 1..2891 /db_xref="H-InvDB:HIT000265862" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4589063" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2891 /gene="ARHGEF10L" /gene_synonym="FLJ10521" /db_xref="GeneID:55160" CDS <1..2662 /gene="ARHGEF10L" /gene_synonym="FLJ10521" /codon_start=2 /product="ARHGEF10L protein" /protein_id="AAH80596.1" /db_xref="GeneID:55160" /translation="GDLFVASFSKSMVLDVYSDYVNNFTSAMSIIKKACLTKPAFLEF LKRRQVCSPDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPRGHPDRLSLQLALTELET LAEKLNEQKRLADQVAEIQQLTKSVSDRSSLNKLLTSGQRQLLLCETLTETVYGDRGQ LIKSKERRVFLLNDMLVCANINFKPANHRGQLEISSLVPLGPKYVVKWNTALPQVQVV EVGQDGGTYDKDNVLIQHSGAKKASASGQAQNKVYLGPPRLFQELQDLQKDLAVVEQI TLLISTLHGTYQNLNMTVAQDWCLALQRLMRVKEEEIHSANKCRLRLLLPGKPDKSGR PISFMVVFITPNPLSKISWVNRLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILAC CIPAFSSRALSLQLGALVHSPVNCPLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFS LNRPSPRTVKSFPLAAPVLCMEYIPELEEEAESRDESPTVADPSATVHPTICLGLQDG SILLYSSVDTGTQCLVSCRSPGLQPVLCLRHSPFHLLAGLQDGTLAAYPRTSGGVLWD LESPPVCLTVGPGPVRTLLSLEDAVWASCGPRVTVLEATTLQPQQSFEAHQDEAVSVT HMVKAGSGVWMAFSSGTSIRLFHTETLEHLQEINIATRTTFLLPGQKHLCVTSLLICQ GLLWVGTDQGVIVLLPVPRLEGIPKITGKGMVSLNGHCGPVAFLAVATSILAPDILRS DQEEAEGPRAEEDKPDGQAHEPMPDSHVGRELTRKKGILLQYRLRSTAHLPGPLLSMR EPAPADGAALEHSEEDGSIYEMADDPDVWVRSRPCARDAHRKEICSVAIISGGQGYRN FGSALGSSGRQAPCGETDSTLLIWQVPLML" BASE COUNT 615 a 922 c 852 g 502 t ORIGIN 1 cggggacctc ttcgtggcct cgttttccaa gtccatggtg ctagatgtgt acagtgacta 61 cgtgaacaac ttcaccagtg ccatgtccat catcaagaag gcctgcctca ccaagcctgc 121 cttcctcgag ttcctcaagc gacggcaggt gtgcagccca gaccgtgtca ccctctacgg 181 gctgatggtc aagcccatcc agaggttccc acagttcata ctcctgcttc aggacatgct 241 gaagaacacc cccaggggcc atccggacag gctgtcgctg cagctggccc tcacagagct 301 ggagacgctg gctgagaagc tgaacgagca gaagcggctg gctgaccagg tggctgagat 361 ccagcagctg accaagagcg tcagtgaccg cagcagcctc aacaagctgt tgacctcagg 421 ccagcggcag ctgctcctgt gtgagacgtt gacggagacc gtgtacggtg accgcgggca 481 gctaattaag tccaaggagc gtcgggtctt cctgctcaac gacatgcttg tctgtgccaa 541 catcaacttc aagcctgcca accacagggg ccagctggag atcagcagcc tggtgcccct 601 ggggcccaag tatgtggtga agtggaacac ggcgctgccc caggtgcagg tggtggaggt 661 gggccaggac ggtggcacct atgacaagga caatgtgctc atccagcact caggcgccaa 721 gaaggcctct gcctcagggc aggctcagaa taaggtgtac ctcggccccc cacgcctctt 781 ccaggagctg caggacctgc agaaggacct ggccgtggtg gagcagatca cgcttctcat 841 cagcacgctg cacggcacct accagaacct gaacatgact gtggctcaag actggtgcct 901 ggccctgcag aggctgatgc gggtgaagga ggaagagatc cactcggcca acaagtgccg 961 tctcaggctc ctgcttcctg ggaaacccga caagtccggc cgccccatta gcttcatggt 1021 ggttttcatc acccccaacc ccctgagcaa gatttcctgg gtcaacaggt tacatttggc 1081 caaaatcgga ctccgggagg agaaccagcc aggctggcta tgcccggatg aggacaagaa 1141 gagcaaagcc ccattctggt gcccgatcct ggcctgctgc atccctgcct tctcctcccg 1201 ggcactcagc ctgcagcttg gggccctggt ccacagtcct gtcaactgtc ccctgctggg 1261 tttctcagca gtcagcacct cccttccaca gggctacctc tgggtcgggg gcggacagga 1321 aggcgcaggg ggccaggtgg aaatcttttc cttgaaccgg ccctcgcccc gcaccgtcaa 1381 gtccttccca ctggcagccc ctgtgctctg catggagtat atcccggagc tggaggagga 1441 ggcggagagc agagacgaga gcccgacagt tgctgacccc tcggccacgg tgcatccaac 1501 catctgcctc gggctccagg atggcagcat cctcctctac agcagtgtgg acactggcac 1561 ccagtgcctg gtgagctgca ggagcccagg tctgcagcct gtgctctgcc tgcgacacag 1621 ccccttccac ctgctcgctg gcctgcagga tgggaccctt gctgcttacc ctcggaccag 1681 cggaggtgtc ctgtgggacc tggagagccc tcccgtgtgc ctgactgtgg ggcccgggcc 1741 tgtccgcacc ctgttgagcc tggaggatgc cgtgtgggcc agctgtgggc cccgggtcac 1801 tgtcctggaa gccaccaccc tgcagcctca gcaaagcttc gaggcgcacc aggacgaggc 1861 agtgagcgtg acacacatgg tgaaggcggg cagcggcgtc tggatggcct tctcctccgg 1921 cacctccatc cgcctcttcc acactgagac cctggagcat ctgcaagaga tcaacatcgc 1981 caccaggacc accttcctcc tgccaggcca gaagcacttg tgtgtcacca gcctcctgat 2041 ctgccagggt ctgctctggg tgggcactga ccagggtgtc atcgtcctgc tgcccgtgcc 2101 tcggctggaa ggcatcccca agatcacagg gaaaggcatg gtctcactca atgggcactg 2161 tgggcctgtg gccttcctgg ctgtggctac cagcatcctg gcccctgaca tcctgcggag 2221 tgaccaggag gaggctgagg ggccccgggc tgaggaggac aagccagacg ggcaggcaca 2281 cgagcccatg cccgacagcc acgtgggccg agagctgacc cgcaagaagg gcatcctctt 2341 gcagtaccgc ctgcgctcca ccgcacacct cccgggcccg ctgctctcca tgcgggagcc 2401 ggcgcctgct gatggcgcag ctttggagca cagcgaggag gacggctcca tttacgagat 2461 ggccgacgac cccgacgtct gggtgcgcag ccggccctgc gcccgcgacg cccaccgcaa 2521 ggagatttgc tctgtggcca tcatctccgg cgggcagggc taccgcaact ttggcagcgc 2581 tctgggcagc agtgggaggc aggccccgtg tggggagacg gacagcaccc tcctcatctg 2641 gcaggtgccc ttgatgctat agcgcctccc ctctcccctc agagggcaca gctgcaggcc 2701 tgaccaaggc cacgcccggc tctcgtgctc taggacctgc acgggacttg tggatgggcc 2761 tggactctcc agaaactact tgggccagag caaaggaaaa cctcttgttt taaaaaaaaa 2821 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2881 aaaaaaaaaa a //