LOCUS BC080593 1556 bp mRNA linear HUM 30-AUG-2004
DEFINITION Homo sapiens sterile alpha motif domain containing 8, mRNA (cDNA
clone IMAGE:4548948), partial cds.
ACCESSION BC080593
VERSION BC080593.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1556)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1556)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389544.
FEATURES Location/Qualifiers
source 1..1556
/db_xref="H-InvDB:HIT000265860"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4548948"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1556
/gene="SAMD8"
/gene_synonym="FLJ25082"
/db_xref="GeneID:142891"
CDS <1..1351
/gene="SAMD8"
/gene_synonym="FLJ25082"
/codon_start=2
/product="SAMD8 protein"
/protein_id="AAH80593.1"
/db_xref="GeneID:142891"
/translation="GEAGRAPDSDGGSDADSEVGPGSPTRTAEAAEEEMAGPNQLCIR
RWTTKHVAVWLKDEGFFEYVDILCNKHRLDGITLLTLTEYDLRSPPLEIKVLGDIKRL
MLSVRKLQKIHIDVLEEMGYNSDSPMGSMTPFISALQSTDWLCNGELSHDCDGPITDL
NSDQYQYMNGKNKHSVRRLDPEYWKTILSCIYVFIVFGFTSFIMVIVHERVPDMQTYP
PLPDIFLDSVPRIPWAFAMTEVCGMILCYIWLLVLLLHKHRSILLRRLCSLMGTVFLL
RCFTMFVTSLSVPGQHLQCTGKIYGSVWEKLHRAFAIWSGFGMTLTGVHTCGDYMFSG
HTVVLTMLNFFVTEYTPRSWNFLHTLSWVLNLFGIFFILAAHEHYSIDVFIAFYITTR
LFLYYHTLANTRAYQQSRRARIWFPMFSFFECNVNGTVPNEYCWPFSKPAIMKRLIG"
BASE COUNT 435 a 319 c 342 g 460 t
ORIGIN
1 cggcgaggcg gggagggccc cggactccga cggcggctcg gacgccgact cggaggtggg
61 tccggggagc ccgactcgga ccgcggaggc agcggaggag gaaatggcag gtcctaatca
121 actctgcatt cgccgctgga ctaccaagca tgtagctgtg tggctgaagg atgaaggctt
181 ttttgaatat gtggacattt tatgcaataa gcaccgactt gatggaatca cattgctaac
241 attgactgaa tatgatctcc ggtctcctcc tctggaaatc aaagtcttag gggacattaa
301 aaggttaatg ctctcagtcc gaaaattgca gaaaatacat attgatgttt tagaagagat
361 gggctacaac agtgacagtc ccatgggttc catgacccct ttcatcagtg ctcttcagag
421 tacagactgg ctctgtaatg gggagctttc ccatgactgt gacggaccca taactgactt
481 gaattctgat cagtaccagt acatgaatgg taaaaacaaa cattctgttc gaagattgga
541 cccagaatac tggaagacta tactgagttg tatatatgtt tttatagtat ttggatttac
601 atctttcatt atggttatag tccatgagcg agtgcctgac atgcagacct atccaccact
661 cccagatata ttcttagaca gcgttcctag aatcccatgg gcctttgcca tgacggaagt
721 atgtggcatg attctgtgct atatttggct cctggttctt cttcttcaca agcacaggtc
781 aatacttctg cgaaggctct gtagtctgat gggaactgta ttcttgcttc gctgctttac
841 catgtttgtg acctccctct ccgtgccagg acaacacctg cagtgtactg gaaagatata
901 tggcagtgta tgggagaaat tacatcgagc ctttgccatt tggagtggct ttggtatgac
961 cctgactggc gttcacacat gtggagatta catgtttagt ggccacacag tcgtcctaac
1021 tatgctgaat ttctttgtca ccgaatatac accaagaagc tggaatttct tgcacacttt
1081 atcctgggtt ctcaacctct ttggaatctt cttcatcttg gctgcccatg aacattattc
1141 tattgatgtg tttattgctt tttatataac aacaagactc tttttgtact accatactct
1201 ggccaatacc agagcatatc agcagagtag gagagcaagg atttggtttc ccatgttctc
1261 tttttttgaa tgcaatgtta atggcacagt acctaatgaa tattgttggc cattttcaaa
1321 accagcaata atgaaaagac taattggatg aatactatct ttctaatgaa tttgtgatta
1381 aatatataat agttgttgaa aatgagtaac tttgcgttct ccccctaggt tgttcttaga
1441 tgcctggctt atgtgttgac aaagtaaagt tttctgttct gagcaaagtt atgacataaa
1501 aagcaagtgt tttccccaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//