LOCUS BC080584 1913 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens PDZ domain containing 4, mRNA (cDNA clone IMAGE:3503412), partial cds. ACCESSION BC080584 VERSION BC080584.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1913) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1913) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: a Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1913 /db_xref="H-InvDB:HIT000265852" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3503412" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1913 /gene="PDZK4" /gene_synonym="FLJ34125" /gene_synonym="KIAA1444" /gene_synonym="LU1" /gene_synonym="PDZD4" /gene_synonym="PDZRN4L" /db_xref="GeneID:57595" CDS <1..710 /gene="PDZK4" /gene_synonym="FLJ34125" /gene_synonym="KIAA1444" /gene_synonym="LU1" /gene_synonym="PDZD4" /gene_synonym="PDZRN4L" /codon_start=3 /product="PDZK4 protein" /protein_id="AAH80584.1" /db_xref="GeneID:57595" /translation="EAGRRQHAEERGRRNPKTGLTLERVGPESSPYLSRRHRGQGQEG EHYHSCVQLAPTRGLEELGHGPLSLAGGPRVGGVAAAATEAPRMEWKVKVRSDGTRYV AKRPVRDRLLKARALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLIRAREQRKR REFMMQSRLECLREQQNGDSKPELNIIALSHRKTMKKRNKKILDNWITIQEMLAHGAR SADGKRVYNPLLSVTTV" BASE COUNT 388 a 551 c 650 g 324 t ORIGIN 1 ctgaggccgg ccggaggcag cacgcggagg agcgcggccg ccgcaacccc aagacggggt 61 tgaccctgga gcgtgtgggc cctgaaagca gcccttacct ctcgcggcgc caccgcggcc 121 agggccagga gggcgagcac taccacagct gcgtgcagct ggccccgacg cgaggcctgg 181 aggagctggg ccacggcccc ctgagcttgg ccggtggccc tcgggtgggc ggggtggcgg 241 ccgcggccac tgaagcaccg cgcatggagt ggaaagtgaa ggtgcgcagc gacggaaccc 301 gctacgtggc caagcggccc gtgcgagatc ggctgctgaa agcccgtgcc ctgaagatcc 361 gggaggagcg cagcggtatg acgaccgacg acgacgcggt gagcgagatg aagatgggcc 421 gctactggag caaggaggag cggaagcagc acctgatccg ggcccgtgag cagcggaagc 481 ggcgcgagtt catgatgcag agccggctgg agtgcctgcg ggagcagcag aatggcgaca 541 gcaagcccga gctcaacatc attgccctga gccaccgcaa aaccatgaag aagcggaaca 601 agaagatcct ggacaactgg atcaccatcc aggagatgct ggcccacggc gcgcgctccg 661 ccgatggcaa gcgggtctac aaccctcttc tctcagtcac caccgtgtga gctgcccggg 721 cgggtacacg gcccaggccc agggaacccc ctggggcccc ggccctcact ctcctataga 781 gattgtgtgt gtgtgtgtgt gcgcgcgcgc gtgctcgctg tgcgcacgca cacatctcct 841 cgtctgggtg tgcgcacagg gctttgttag cagagagaag cccctgagga gaagggacgc 901 ttttcttcct tctgcccaag taaagtgacc atgccagtgg ccagcactgg gggcacacct 961 gtgatgggca ccccttcagc tgtgcgtgtg cattccccat cccccatgct cttgcgtgtg 1021 cttgcacgtg cacgcacaca cacacccagt gctctctcca cccgacccgt gtacttgcag 1081 acagggaagc tgagctgaaa ggagcacaag agagtgtccg gcttcgctgc tgagcgcggc 1141 ctctccccgc cgctgcgcac tgcagttatt tgtagacaaa ggcacccctg atttttgtgg 1201 tttttctccc tttctgtgct tgccaatagt tgttttgttt tgtggacctg ccctgggggc 1261 tggcagctcc ttcaggcagc ctggcagaag tggaactccc ctctccactg atggctggga 1321 agggagttgg ggaggaagag tgggagggag ggctggggat ggatgggagg gaaggggagg 1381 gaaaggtggg aggaatggga agcagctgtt ctggtggctt ccactctgag gtgtgggaac 1441 ggggagcctc tggggggcac ctgtttcccc agtgactcag agagagcaag actgcaggaa 1501 cggaggggtc ctgcagggtg tccaccaaga agtcacagag cccgttctgc gccccacacc 1561 atctggagca ggggcttctc ttctgagtga actgaggaag gtgcttagat ggtgagggct 1621 ctagaaacca agccccatga gcagcagtgg aagacctcgg gccatgcggc ctggggagga 1681 cttggtggcg atccgcaacc tggaccccag tgagaggcgg tgggctgact gggaaggaga 1741 ggcccccaac ctcctcagga tttgcacgtg tgaactaggc tgcctgtggg gtgcccctta 1801 ggcttggaga gccccagatt ggaggcagac agactgcacc accccttccc cccctgcatc 1861 tcaagaataa agcaagctgc ctttgtactt ggttgaaaaa aaaaaaaaaa aaa //