LOCUS BC080583 2187 bp mRNA linear HUM 07-SEP-2004
DEFINITION Homo sapiens cDNA clone IMAGE:2822684, partial cds.
ACCESSION BC080583
VERSION BC080583.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2187)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2187)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: a Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34304116.
FEATURES Location/Qualifiers
source 1..2187
/db_xref="H-InvDB:HIT000265851"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2822684"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS <1..2099
/codon_start=3
/product="Unknown (protein for IMAGE:2822684)"
/protein_id="AAH80583.1"
/translation="RFLFVDRCDRHLTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ
DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG
RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV
EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI
FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI
QKESTLHLVLRLRGGV"
BASE COUNT 617 a 568 c 564 g 438 t
ORIGIN
1 cgcggttctt gtttgtggat cgctgtgatc gtcacttgac aatgcagatc ttcgtgaaga
61 ctctgactgg taagaccatc accctcgagg ttgagcccag tgacaccatc gagaatgtca
121 aggcaaagat ccaagataag gaaggcatcc ctcctgacca gcagaggctg atctttgctg
181 gaaaacagct ggaagatggg cgcaccctgt ctgactacaa catccagaaa gagtccaccc
241 tgcacctggt gctccgtctc agaggtggga tgcaaatctt cgtgaagaca ctcactggca
301 agaccatcac ccttgaggtg gagcccagtg acaccatcga gaacgtcaaa gcaaagatcc
361 aggacaagga aggcattcct cctgaccagc agaggttgat ctttgccgga aagcagctgg
421 aagatgggcg caccctgtct gactacaaca tccagaaaga gtctaccctg cacctggtgc
481 tccgtctcag aggtgggatg cagatcttcg tgaagaccct gactggtaag accatcaccc
541 tcgaggtgga gcccagtgac accatcgaga atgtcaaggc aaagatccaa gataaggaag
601 gcattcctcc tgatcagcag aggttgatct ttgccggaaa acagctggaa gatggtcgta
661 ccctgtctga ctacaacatc cagaaagagt ccaccttgca cctggtactc cgtctcagag
721 gtgggatgca aatcttcgtg aagacactca ctggcaagac catcaccctt gaggtcgagc
781 ccagtgacac tatcgagaac gtcaaagcaa agatccaaga caaggaaggc attcctcctg
841 accagcagag gttgatcttt gccggaaagc agctggaaga tgggcgcacc ctgtctgact
901 acaacatcca gaaagagtct accctgcacc tggtgctccg tctcagaggt gggatgcaga
961 tcttcgtgaa gaccctgact ggtaagacca tcaccctcga agtggagccg agtgacacca
1021 ttgagaatgt caaggcaaag atccaagaca aggaaggcat ccctcctgac cagcagaggt
1081 tgatctttgc cggaaaacag ctggaagatg gtcgtaccct gtctgactac aacatccaga
1141 aagagtccac cttgcacctg gtgctccgtc tcagaggtgg gatgcagatc ttcgtgaaga
1201 ccctgactgg taagaccatc actctcgagg tggagccgag tgacaccatt gagaatgtca
1261 aggcaaagat ccaagacaag gaaggcatcc ctcctgatca gcagaggttg atctttgctg
1321 ggaaacagct ggaagatgga cgcaccctgt ctgactacaa catccagaaa gagtccaccc
1381 tgcacctggt gctccgtctt agaggtggga tgcagatctt cgtgaagacc ctgactggta
1441 agaccatcac tctcgaagtg gagccgagtg acaccattga gaatgtcaag gcaaagatcc
1501 aagacaagga aggcatccct cctgaccagc agaggttgat ctttgctggg aaacagctgg
1561 aagatggacg caccctgtct gactacaaca tccagaaaga gtccaccctg cacctggtgc
1621 tccgtcttag aggtgggatg cagatcttcg tgaagaccct gactggtaag accatcactc
1681 tcgaagtgga gccgagtgac accattgaga atgtcaaggc aaagatccaa gacaaggaag
1741 gcatccctcc tgaccagcag aggttgatct ttgctgggaa acagctggaa gatggacgca
1801 ccctgtctga ctacaacatc cagaaagagt ccaccctgca cctggtgctc cgtctcagag
1861 gtgggatgca gatcttcgtg aagaccctga ctggtaagac catcaccctc gaggtggagc
1921 ccagtgacac catcgagaat gtcaaggcaa agatccaaga taaggaaggc atccctcctg
1981 atcagcagag gttgatcttt gctgggaaac agctggaaga tggacgcacc ctgtctgact
2041 acaacatcca gaaagagtcc actctgcact tggtcctgcg cttgaggggg ggtgtctaag
2101 tttccccttt taaggtttca acaaatttca ttgcactttc ctttcaataa agttgttgca
2161 ttcccaaaaa aaaaaaaaaa aaaaaaa
//