LOCUS BC080528 2722 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens chromosome 20 open reading frame 194, mRNA (cDNA clone
IMAGE:4589057), partial cds.
ACCESSION BC080528
VERSION BC080528.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2722)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2722)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 59 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2722
/db_xref="H-InvDB:HIT000265799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4589057"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2722
/gene="C20orf194"
/gene_synonym="DKFZp434N061"
/db_xref="GeneID:25943"
CDS <1..1288
/gene="C20orf194"
/gene_synonym="DKFZp434N061"
/codon_start=2
/product="C20orf194 protein"
/protein_id="AAH80528.1"
/db_xref="GeneID:25943"
/translation="SIVTGLPGCHASELCAFLVTLHKECGRWMVYRQIMDSSECFHAA
HFQRYLSSALEAQQNRSARQSAYIRKKTRLLVVLQGYTDVIDVVQALQTHPDSNVKAS
FTIGAITACVEPMSCYMEHRFLFPKCLDQCSQGLVSNVVFTSHTTEQRHPLLVQLQSL
IRAANPAAAFILAENGIVTRNEDIELILSENSFSSPEMLRSRYLMYPGWYEGKLNAGS
VYPLMVQICVWFGRPLEKTRFVAKCKAIQSSIKPSPFSGNIYHILGKVKFSDSERTME
VCYNTLANSLSIMPVLEGPTPPPDSKSVSQDSSGQQECYLVFIGCSLKEDSIKDWLRQ
SAKQKPQRKALKTRGMLTQQEIRSIHVKRHLEPLPAGYFYNGTQFVNFFGDKTDFHPL
MDQFMNDYVEEANREIEKYNQELEQQEYHDLFELKP"
BASE COUNT 654 a 692 c 715 g 661 t
ORIGIN
1 cagcattgta accggcctcc caggctgtca cgctagcgag ctctgtgctt ttctggtcac
61 tctgcataag gaatgtggca gatggatggt gtatcgccaa atcatggaca gctctgaatg
121 ttttcatgct gcacacttcc agagatacct ttccagtgcc ctagaggccc agcagaaccg
181 ctctgcgcgc cagtcagcct acatccgcaa gaagaccaga ctgctggtgg tgttacaagg
241 ctacacagat gttattgatg ttgtccaggc cctgcagacc cacccagact caaatgtcaa
301 ggcctccttc accattggtg ccatcacagc atgtgtggag cccatgagct gctacatgga
361 gcacagattt ctctttccta aatgtcttga ccagtgttca caaggcctgg tgagtaacgt
421 ggtattcacc agtcacacca cggagcagcg gcaccctctc cttgttcagc tgcagagcct
481 catcagggct gccaatcctg ctgcagcctt cattcttgca gaaaatggga ttgtcaccag
541 gaatgaagac attgagctga ttctctcaga aaacagtttt tcaagtcctg agatgctacg
601 atctcgatat ttaatgtatc ctggctggta tgaaggtaaa ttgaatgctg gatcagtcta
661 tcccctaatg gttcagatct gcgtatggtt tggccgtccc ttggagaaga ctcgctttgt
721 ggccaaatgt aaagcaattc agtcctccat caagccaagt cccttctccg gaaacatcta
781 ccacatcctg ggcaaagtga agttttcaga ctctgagagg accatggagg tctgctacaa
841 cacactggcc aactccttga gcatcatgcc agttttggaa ggacccacac caccaccaga
901 ctccaaaagc gtatctcaag acagcagcgg gcagcaggag tgctaccttg tgttcatcgg
961 ctgctccctg aaggaagaca gcatcaagga ctggctgcgg cagtcagcta agcagaagcc
1021 tcagaggaaa gccctgaaga ccagggggat gctgacgcaa caggagatca ggagcatcca
1081 cgtaaaacgc cacttggaac ccctacctgc aggctacttt tataatggca cccaatttgt
1141 taacttcttt ggtgacaaaa ctgattttca cccactcatg gaccagttca tgaatgacta
1201 cgtggaagaa gccaaccggg aaattgagaa gtataaccag gagctggaac agcaggagta
1261 tcatgacctc tttgagctga agccctagag gaaggctggg cccgtacgtc ctgcagaatg
1321 tccaccttgg agatggacga acgggtgtct taacctcagc tctcctggag gcctctccct
1381 taaggggctg tctttgttct ccttggcctg tgtgtgctgg cttgagtgca tgttgtcttt
1441 attccctgta tagcgctgaa gagcatcacc tgcaccattg attttggggg tcgggggaat
1501 actcaaggat gagcagatgg ggcctgcccg tctacgtgtg caactggcag tccaggagct
1561 ctgggtttct gataacagga tctcctttgg gctcttgagg ttggggagaa gcattaggat
1621 tacacagagg agctactggg acttagaagg aaccctggct gcctgaactg tggccgtgtc
1681 tgggaggcga ggccacgaca ggcctcaagc ctcagatgct gctccacgag agccatcttc
1741 cccagtggag tgcctgcctc ccctgctagg cccgtttccc tgaaggagct ggccgtactg
1801 gccgtgggcc cagtcctggg aggagcagca cagccttgcc caggcccagt ccacagagcc
1861 agcagcttgg gttgagatga atgatgtgtt cacaaatgag gggatttccc ttctggacta
1921 aactgaagga gaggcttgtt gctttccaga ggtgtgtggc tcttaagttg acatcagctt
1981 ttccccttgt gggtggttct ttagctctcc tgtcacacca ttcgggtgtc ctaatgtagg
2041 gacaagagca agcctgctgc tcaggccccc tggcgaggct tcacctcact gtggaagggg
2101 gcgtcctgca gctggttagt cttaggcctg gtggctgatc acttgtgggg tcagtctcca
2161 gcacccagcg ctcccacaag ccttgccaag gaaggcctgc ttttcagcca caaacttcag
2221 gaaactcatc cccccgctcc ccaaagtgtt gttgctggcc ctgggcttgt gtggctcctg
2281 aggattggga atttcaaata attgcaatac ctgagttaga attccttcta atggcatcgt
2341 tttaagctgg accataaagc agaggggaat tacaagtgtg tcccatgcct gaccttcata
2401 attggtgtgg gggacagggg agtcacagcc actgatattt aggtgatgtc tcttaggact
2461 tcagtgcctc agctacctga actgtaaatg ttttctgaat ttcacatatt tttttttgca
2521 tgccttagga agaagcacat aggtaaaacc agcagtttcc agtaatatag ggggtttttg
2581 agcaaggccc ctggagcagc ggagagacaa gatggagcac atgtagtctg tgtgcctggt
2641 cacacagagg cctgcatgca agtagcaaag cagctctcaa gggcttgtca gtaaaatata
2701 ttagaaaaaa aaaaaaaaaa aa
//