LOCUS BC080516 1095 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptides B and B1, mRNA (cDNA clone MGC:99669 IMAGE:2822685), complete cds. ACCESSION BC080516 VERSION BC080516.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1095) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1095) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 59 Row: a Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38149990. FEATURES Location/Qualifiers source 1..1095 /db_xref="H-InvDB:HIT000265788" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:99669 IMAGE:2822685" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1095 /gene="SNRPB" /gene_synonym="COD" /gene_synonym="SmB/SmB'" /gene_synonym="snRNP-B" /db_xref="GeneID:6628" /db_xref="HGNC:HGNC:11153" /db_xref="MIM:182282" CDS 82..777 /gene="SNRPB" /gene_synonym="COD" /gene_synonym="SmB/SmB'" /gene_synonym="snRNP-B" /codon_start=1 /product="small nuclear ribonucleoprotein polypeptides B and B1" /protein_id="AAH80516.1" /db_xref="GeneID:6628" /db_xref="HGNC:HGNC:11153" /db_xref="MIM:182282" /translation="MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCD CDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAG GPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATAS IAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPP GMRPPPPGMRGLL" BASE COUNT 252 a 308 c 310 g 225 t ORIGIN 1 gcgggaaatc ggctgtggga gagaggctag gcctctgagg aggcgaatcc ggcgggtatc 61 agagccatca gaaccgccac catgacggtg ggcaagagca gcaagatgct gcagcatatt 121 gattacagga tgaggtgcat cctgcaggac ggccggatct tcattggcac cttcaaggct 181 tttgacaagc acatgaattt gatcctctgt gactgtgatg agttcagaaa gatcaagcca 241 aagaactcca aacaagcaga aagggaagag aagcgagtcc tcggtctggt gctgctgcga 301 ggggagaatc tggtctcaat gacagtagag ggacctcctc ccaaagatac tggtattgct 361 cgagttccac ttgctggagc tgccgggggc ccagggatcg gcagggctgc tggcagagga 421 atcccagctg gggttcccat gccccaggct cctgcaggac ttgctgggcc agtccgtggg 481 gttggcgggc catcccaaca ggtgatgacc ccacaaggaa gaggtactgt tgcagccgct 541 gcagctgctg ccacagccag tattgccggg gctccaaccc agtacccacc tggccgtggg 601 ggtcctcccc cacctatggg ccgaggagca ccccctccag gcatgatggg cccacctcct 661 ggtatgagac ctcctatggg tcccccaatg gggatccccc ctggaagagg gactccaatg 721 ggcatgcccc ctccgggaat gcggcctcct ccccctggga tgcgaggcct tctttgaccc 781 ttggccacag agtatggaag tagctccgca gaggcgtggg ctcgattcct cagggccacg 841 ttaccacaga cctgtttgtt tcttatgctg ttgttcgtgg agtctcatgg gattgtctgg 901 tttcccttac agggccccct cccccgggaa tgcgcccacc aaggccctag actcatcttg 961 gccctcctca gctccctgcc tgtttcccgt aaggctgtac atagtccttt tatctccttg 1021 tggcctatga aactggttta taataaactc ttaagagaac attaaaaaaa aaaaaaaaaa 1081 aaaaaaaaaa aaaaa //