LOCUS BC080195 3472 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Rho GTPase activating protein 17, mRNA (cDNA clone
MGC:87805 IMAGE:6172310), complete cds.
ACCESSION BC080195
VERSION BC080195.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3472)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3472)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: l Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54860078.
FEATURES Location/Qualifiers
source 1..3472
/db_xref="H-InvDB:HIT000265784"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87805 IMAGE:6172310"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3472
/gene="ARHGAP17"
/gene_synonym="MST066"
/gene_synonym="MST110"
/gene_synonym="MSTP066"
/gene_synonym="MSTP110"
/gene_synonym="NADRIN"
/gene_synonym="RICH1"
/gene_synonym="WBP15"
/db_xref="GeneID:55114"
/db_xref="HGNC:HGNC:18239"
/db_xref="MIM:608293"
CDS 71..2716
/gene="ARHGAP17"
/gene_synonym="MST066"
/gene_synonym="MST110"
/gene_synonym="MSTP066"
/gene_synonym="MSTP110"
/gene_synonym="NADRIN"
/gene_synonym="RICH1"
/gene_synonym="WBP15"
/codon_start=1
/product="Rho GTPase activating protein 17"
/protein_id="AAH80195.1"
/db_xref="GeneID:55114"
/db_xref="HGNC:HGNC:18239"
/db_xref="MIM:608293"
/translation="MKKQFNRMKQLANQTVGRAEKTEVLSEDLLQIERRLDTVRSICH
HSHKRLVACFQGQHGTDAERRHKKLPLTALAQNMQEASTQLEDSLLGKMLETCGDAEN
QLALELSQHEVFVEKEIVDPLYGIAEVEIPNIQKQRKQLARLVLDWDSVRARWNQAHK
SSGTNFQGLPSKIDTLKEEMDEAGNKVEQCKDQLAADMYNFMAKEGEYGKFFVTLLEA
QADYHRKALAVLEKTLPEMRAHQDKWAEKPAFGTPLEEHLKRSGREIALPIEACVMLL
LETGMKEEGLFRIGAGASKLKKLKAALDCSTSHLDEFYSDPHAVAGALKSYLRELPEP
LMTFNLYEEWTQVASVQDQDKKLQDLWRTCQKLPPQNFVNFRYLIKFLAKLAQTSDVN
KMTPSNIAIVLGPNLLWARNEGTLAEMAAATSVHVVAVIEPIIQHADWFFPEEVEFNV
SEAFVPLTTPSSNHSFHTGNDSDSGTLERKRPASMAVMEGDLVKKESFGVKLMDFQAH
RRGGTLNRKHISPAFQPPLPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILE
QGPSPGDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGP
SPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHT
GQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMA
LPSEHGLEQPSHTPPQTPTPPSTPPLGKQNPSLPAPQTLAGGNPETAQPHAGTLPRPR
PVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMH
SDSASKDVPGRILLDIDNDTESTAL"
BASE COUNT 927 a 991 c 842 g 712 t
ORIGIN
1 gtagtagctg ccaggctgtc ccccgccctg cccggcccga gccccgcggg ccgccgccgc
61 caccgccgcc atgaagaagc agttcaaccg catgaagcag ctggctaacc agaccgtggg
121 cagagctgag aaaacagaag tccttagtga agatctatta cagattgaga gacgcctgga
181 cacggtgcgg tcaatatgcc accattccca taagcgcttg gtggcatgtt tccagggcca
241 gcatggcacc gatgccgaga ggagacacaa aaaactgcct ctgacagctc ttgctcaaaa
301 tatgcaagaa gcatcgactc agctggaaga ctctctcctg gggaagatgc tggagacgtg
361 tggagatgct gagaatcagc tggctctcga gctctcccag cacgaagtct ttgttgagaa
421 ggagatcgtg gaccctctgt acggcatagc tgaggtggag attcccaaca tccagaagca
481 gaggaagcag cttgcaagat tggtgttaga ctgggattca gtcagagcca ggtggaacca
541 agctcacaaa tcctcaggaa ccaactttca ggggcttcca tcaaaaatag atactctaaa
601 ggaagagatg gatgaagctg gaaataaagt agaacagtgc aaggatcaac ttgcagcaga
661 catgtacaac tttatggcca aagaagggga gtatggcaaa ttctttgtta cgttattaga
721 agcccaagca gattaccata gaaaagcatt agcagtctta gaaaagaccc tccccgaaat
781 gcgagcccat caagataagt gggcggaaaa accagccttt gggactcccc tagaagaaca
841 cctgaagagg agcgggcgcg agattgcgct gcccattgaa gcctgtgtca tgctgcttct
901 ggagacaggc atgaaggagg agggcctttt ccgaattggg gctggggcct ccaagttaaa
961 gaagctgaaa gctgctttgg actgttctac ttctcacctg gatgagttct attcagaccc
1021 ccatgctgta gcaggtgctt taaaatccta tttacgggaa ttgcctgaac ctttgatgac
1081 ttttaatctg tatgaagaat ggacacaagt tgcaagtgtg caggatcaag acaaaaaact
1141 tcaagacttg tggagaacat gtcagaagtt gccaccacaa aattttgtta actttagata
1201 tttgatcaag ttccttgcaa agcttgctca gaccagcgat gtgaataaaa tgactcccag
1261 caacattgcg attgtgttag gccctaactt gttatgggcc agaaatgaag gaacacttgc
1321 tgaaatggca gcagccacat ccgtccatgt ggttgcagtg attgaaccca tcattcagca
1381 tgccgactgg ttcttccctg aagaggtgga atttaatgta tcagaagcat ttgtacctct
1441 caccaccccg agttctaatc actcattcca cactggaaac gactctgact cggggaccct
1501 ggagaggaag cggcctgcta gcatggcggt gatggaagga gacttggtga agaaggaaag
1561 ctttggtgtg aagcttatgg acttccaggc ccaccggcgg ggtggcactc taaatagaaa
1621 gcacatatcc cccgctttcc agccgccact tccgcccaca gatggcagca ccgtggtgcc
1681 cgctggccca gagccccctc cccagagctc tagggctgaa agcagctctg ggggtgggac
1741 tgtcccctct tccgcgggca tactggagca ggggccgagc ccaggcgacg gcagtcctcc
1801 caaaccgaag gaccctgtat ctgcagctgt gccagcacca gggagaaaca acagtcagat
1861 agcatctggc caaaatcagc cccaggcagc tgctggctcc caccagctct ccatgggcca
1921 acctcacaat gctgcagggc ccagcccgca tacactgcgc cgagctgtta aaaaacccgc
1981 tccagcaccc ccgaaaccgg gcaacccacc tcctggccac cccgggggcc agagttcttc
2041 aggaacatct cagcatccac ccagtctgtc accaaagcca cccacccgaa gcccctctcc
2101 tcccacccag cacacgggcc agcctccagg ccagccctcc gccccctccc agctctcagc
2161 accccggagg tactccagca gcttgtctcc aatccaagct cccaatcacc caccgccgca
2221 gccccctacg caggccacgc cactgatgca caccaaaccc aatagccagg gccctcccaa
2281 ccccatggca ttgcccagtg agcatggact tgagcagcca tctcacaccc ctccccagac
2341 tccaacgccc cccagtactc cgcccctagg aaaacagaac cccagtctgc cagctcctca
2401 gaccctggca gggggtaacc ctgaaactgc acagccacat gctggaacct taccgagacc
2461 gagaccagta ccaaagccaa ggaaccggcc cagcgtgccc ccaccccccc aacctcctgg
2521 tgtccactca gctggggaca gcagcctcac caacacagca ccaacagctt ccaagatagt
2581 aacagactcc aattccaggg tttcagaacc gcatcgcagc atctttcctg aaatgcactc
2641 agactcagcc agcaaagacg tgcctggccg catcctgctg gatatagaca atgataccga
2701 gagcactgcc ctgtgaagaa agccctttcc cagccctcca ccacttccac cctggcgagt
2761 ggagcagggg caggcgaacc tctttctttg cagaccgaac agtgaaaagc tttcagtgga
2821 ggacaaagga gggcctcact gtgcgggacc tggccttctg cacggcccaa ggagaacctg
2881 gaggccacca ctaaagctga atgacctgtg tcttgaagaa gttggctttc tttacatggg
2941 aaggaaatca tgccaaaaaa atccaaaaca aagaagtacc tggagtggag agagtattcc
3001 tgctgaaacg cgcataggaa gcttttgtcc ctgctgttaa tgcgggcagc acctacagca
3061 acttggaatg agtaagaagc agtgcgttaa ctatctattt aataaaatgc gctcattatg
3121 caagtcgcct actctctgct acctggacgt tcattcttat gtattaggag ggaggctgcg
3181 ctccttcaga cttgctgcag aatcattttg tatcatgtat ggtctgtgtc tccccagtcc
3241 cctcagaacc atgcccatgg atggtgactg ctggctctgt cacctcatca aactggatgt
3301 gacccatgcc gcctcgttgg attgtcggaa tgtagacaga aatgtactgt tctttttttt
3361 ttttttaaac aatgtaattg ctacttgata aggaccgaac attattctag tttcatgttt
3421 aatttgaatt aaatatattc tgtggtttat atgaaaaaaa aaaaaaaaaa aa
//