LOCUS BC080186 1850 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens yrdC domain containing (E. coli), mRNA (cDNA clone MGC:87915 IMAGE:6147134), complete cds. ACCESSION BC080186 VERSION BC080186.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1850) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1850) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: j Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58761509. FEATURES Location/Qualifiers source 1..1850 /db_xref="H-InvDB:HIT000265775" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:87915 IMAGE:6147134" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1850 /gene="YRDC" /gene_synonym="DRIP3" /gene_synonym="FLJ23476" /gene_synonym="IRIP" /gene_synonym="RP11-109P14.4" /gene_synonym="SUA5" /db_xref="GeneID:79693" /db_xref="HGNC:HGNC:28905" CDS 16..855 /gene="YRDC" /gene_synonym="DRIP3" /gene_synonym="FLJ23476" /gene_synonym="IRIP" /gene_synonym="RP11-109P14.4" /gene_synonym="SUA5" /codon_start=1 /product="yrdC domain containing (E. coli)" /protein_id="AAH80186.2" /db_xref="GeneID:79693" /db_xref="HGNC:HGNC:28905" /translation="MSPARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPG ARLLRLPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAA LRAVYRLKGRSEAKPLAVCLGRVADVYRYCRVRVPEGLLKDLLPGPVTLVMERSEELN KDLNPFTPLVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLS LVIDGGQIGDGQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHA SYL" BASE COUNT 407 a 456 c 516 g 471 t ORIGIN 1 agcgggcctg ggcggatgtc tccggcgcgt cggtgcaggg ggatgagggc cgcggtggct 61 gccagcgtgg ggttgagcga ggggcctgct ggctcccgga gcggtcgcct cttccgcccg 121 ccgagtcccg ctccggcggc ccccggcgcc cggctgttgc ggctcccggg gagcggggcc 181 gtgcaggccg cgagcccgga gcgcgccggc tggaccgagg cgctgcgggc cgccgtggcc 241 gagctgcgcg ccggcgccgt ggtggccgtc cccaccgata cgctgtacgg cctggcctgc 301 gcggcgagct gctcggcggc tctgcgcgct gtgtaccgcc tcaagggtcg cagcgaggcc 361 aagcctctgg ccgtatgcct cggccgcgtg gccgacgtct acagatactg ccgtgtgaga 421 gtacctgagg ggctcctgaa agacctactg ccaggaccag tgaccctggt gatggaacgc 481 tcggaggagc tcaacaagga cctaaaccct tttacgcctc ttgtaggcat tcggattcct 541 gatcatgctt ttatgcaaga cttggctcag atgtttgagg gtccgcttgc tctcactagt 601 gccaacctca gctcccaggc cagttctctg aatgtcgagg agttccagga tctctggcct 661 cagttgtcct tggttattga tgggggacaa attggggatg gccagagccc cgagtgtcgc 721 cttggctcaa ctgtggttga tttgtctgtg cccggaaagt ttggcatcat tcgtccaggc 781 tgtgccctgg aaagtactac agccatcctc caacagaagt acggactgct cccctcacat 841 gcgtcctacc tgtgaaactc tgggaagcag gaaggcccaa gacctggtgc tggatactat 901 gtgtctgtcc actgacgact gtcaaggcct catttgcaga ggccaccgga gctagggcac 961 tagcctgact tttaaggcag tgtgtctttc tgagcactgt agaccaagcc cttggagctg 1021 ctggtttagc cttgcacctg gggaaaggat gtatttattt gtattttcat atatcagcca 1081 aaagctgaat ggaaaagtta agaacattcc taggtggcct tattctaata agtttcttct 1141 gtctgttttg tttttcaatt gaaaagtaat taaataacag atttagaatc tagtgagagc 1201 ctcctctctg gtgggtggtg gcatttaagg ttcaaaccag ccagaagtgc tggtgctgtt 1261 taaaaagtct caggtggctg cgtgtggtgg ctcatgcctg taatcccaac attctgggag 1321 gcccaggcgg gagaactgct tgagcccagg agttcagaat cagcctgggc aacatagcaa 1381 tactccgtct cataaaaatt aataaataaa aagtctcagg tgaccaaagg ctcctgaagc 1441 tagaaccagg tttggataaa gattgaagag ccacaggcca ctcttccctc tgagccattg 1501 ggcctagtgg tgtcatgtat tgtaattgct cgcagggaga gcagtctttt tggtgtaata 1561 gtgggatgtc tgcttagttg gcaggggttc agtccaaatg gaagaatatt gggaaataaa 1621 cctccactat cctttatagc cagggacttt tttcctattt attcataaaa taaattatag 1681 ttaattatac ccataacacc tttatttaaa tccagtgttc tccgcagcct tttgtctatt 1741 tatatgtgta ccaagtgtta aacataatta ttattgggca tttgaacttt gtttttcttt 1801 aaagaaatgc tgctattaaa catatttgta aatggaaaaa aaaaaaaaaa //