LOCUS       BC080186                1850 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens yrdC domain containing (E. coli), mRNA (cDNA clone
            MGC:87915 IMAGE:6147134), complete cds.
ACCESSION   BC080186
VERSION     BC080186.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1850)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1850)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 174 Row: j Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 58761509.
FEATURES             Location/Qualifiers
     source          1..1850
                     /db_xref="H-InvDB:HIT000265775"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:87915 IMAGE:6147134"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_72"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1850
                     /gene="YRDC"
                     /gene_synonym="DRIP3"
                     /gene_synonym="FLJ23476"
                     /gene_synonym="IRIP"
                     /gene_synonym="RP11-109P14.4"
                     /gene_synonym="SUA5"
                     /db_xref="GeneID:79693"
                     /db_xref="HGNC:HGNC:28905"
     CDS             16..855
                     /gene="YRDC"
                     /gene_synonym="DRIP3"
                     /gene_synonym="FLJ23476"
                     /gene_synonym="IRIP"
                     /gene_synonym="RP11-109P14.4"
                     /gene_synonym="SUA5"
                     /codon_start=1
                     /product="yrdC domain containing (E. coli)"
                     /protein_id="AAH80186.2"
                     /db_xref="GeneID:79693"
                     /db_xref="HGNC:HGNC:28905"
                     /translation="MSPARRCRGMRAAVAASVGLSEGPAGSRSGRLFRPPSPAPAAPG
                     ARLLRLPGSGAVQAASPERAGWTEALRAAVAELRAGAVVAVPTDTLYGLACAASCSAA
                     LRAVYRLKGRSEAKPLAVCLGRVADVYRYCRVRVPEGLLKDLLPGPVTLVMERSEELN
                     KDLNPFTPLVGIRIPDHAFMQDLAQMFEGPLALTSANLSSQASSLNVEEFQDLWPQLS
                     LVIDGGQIGDGQSPECRLGSTVVDLSVPGKFGIIRPGCALESTTAILQQKYGLLPSHA
                     SYL"
BASE COUNT          407 a          456 c          516 g          471 t
ORIGIN      
        1 agcgggcctg ggcggatgtc tccggcgcgt cggtgcaggg ggatgagggc cgcggtggct
       61 gccagcgtgg ggttgagcga ggggcctgct ggctcccgga gcggtcgcct cttccgcccg
      121 ccgagtcccg ctccggcggc ccccggcgcc cggctgttgc ggctcccggg gagcggggcc
      181 gtgcaggccg cgagcccgga gcgcgccggc tggaccgagg cgctgcgggc cgccgtggcc
      241 gagctgcgcg ccggcgccgt ggtggccgtc cccaccgata cgctgtacgg cctggcctgc
      301 gcggcgagct gctcggcggc tctgcgcgct gtgtaccgcc tcaagggtcg cagcgaggcc
      361 aagcctctgg ccgtatgcct cggccgcgtg gccgacgtct acagatactg ccgtgtgaga
      421 gtacctgagg ggctcctgaa agacctactg ccaggaccag tgaccctggt gatggaacgc
      481 tcggaggagc tcaacaagga cctaaaccct tttacgcctc ttgtaggcat tcggattcct
      541 gatcatgctt ttatgcaaga cttggctcag atgtttgagg gtccgcttgc tctcactagt
      601 gccaacctca gctcccaggc cagttctctg aatgtcgagg agttccagga tctctggcct
      661 cagttgtcct tggttattga tgggggacaa attggggatg gccagagccc cgagtgtcgc
      721 cttggctcaa ctgtggttga tttgtctgtg cccggaaagt ttggcatcat tcgtccaggc
      781 tgtgccctgg aaagtactac agccatcctc caacagaagt acggactgct cccctcacat
      841 gcgtcctacc tgtgaaactc tgggaagcag gaaggcccaa gacctggtgc tggatactat
      901 gtgtctgtcc actgacgact gtcaaggcct catttgcaga ggccaccgga gctagggcac
      961 tagcctgact tttaaggcag tgtgtctttc tgagcactgt agaccaagcc cttggagctg
     1021 ctggtttagc cttgcacctg gggaaaggat gtatttattt gtattttcat atatcagcca
     1081 aaagctgaat ggaaaagtta agaacattcc taggtggcct tattctaata agtttcttct
     1141 gtctgttttg tttttcaatt gaaaagtaat taaataacag atttagaatc tagtgagagc
     1201 ctcctctctg gtgggtggtg gcatttaagg ttcaaaccag ccagaagtgc tggtgctgtt
     1261 taaaaagtct caggtggctg cgtgtggtgg ctcatgcctg taatcccaac attctgggag
     1321 gcccaggcgg gagaactgct tgagcccagg agttcagaat cagcctgggc aacatagcaa
     1381 tactccgtct cataaaaatt aataaataaa aagtctcagg tgaccaaagg ctcctgaagc
     1441 tagaaccagg tttggataaa gattgaagag ccacaggcca ctcttccctc tgagccattg
     1501 ggcctagtgg tgtcatgtat tgtaattgct cgcagggaga gcagtctttt tggtgtaata
     1561 gtgggatgtc tgcttagttg gcaggggttc agtccaaatg gaagaatatt gggaaataaa
     1621 cctccactat cctttatagc cagggacttt tttcctattt attcataaaa taaattatag
     1681 ttaattatac ccataacacc tttatttaaa tccagtgttc tccgcagcct tttgtctatt
     1741 tatatgtgta ccaagtgtta aacataatta ttattgggca tttgaacttt gtttttcttt
     1801 aaagaaatgc tgctattaaa catatttgta aatggaaaaa aaaaaaaaaa
//