LOCUS BC080185 1314 bp mRNA linear HUM 11-APR-2007 DEFINITION Homo sapiens structural maintenance of chromosomes 1A, mRNA (cDNA clone IMAGE:6069353), partial cds. ACCESSION BC080185 VERSION BC080185.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1314) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1314) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (16-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: h Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30581134. FEATURES Location/Qualifiers source 1..1314 /db_xref="H-InvDB:HIT000265774" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6069353" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1314 /gene="SMC1A" /gene_synonym="CDLS2" /gene_synonym="DXS423E" /gene_synonym="SB1.8" /gene_synonym="SMC1" /gene_synonym="SMC1alpha" /gene_synonym="SMCB" /db_xref="GeneID:8243" /db_xref="HGNC:HGNC:11111" /db_xref="MIM:300040" CDS 64..>1314 /gene="SMC1A" /gene_synonym="CDLS2" /gene_synonym="DXS423E" /gene_synonym="SB1.8" /gene_synonym="SMC1" /gene_synonym="SMC1alpha" /gene_synonym="SMCB" /codon_start=1 /product="SMC1A protein" /protein_id="AAH80185.1" /db_xref="GeneID:8243" /db_xref="HGNC:HGNC:11111" /db_xref="MIM:300040" /translation="MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDA ISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGS SEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISR SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVR AQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMRE QQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMD ELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQE LEKFNRDQKADQDRLDLEERKKKKK" BASE COUNT 420 a 266 c 392 g 236 t ORIGIN 1 ggctacctca gttctcgggc gtacggcgcg gcctgtccta ctgccgccgg cgccgcggcc 61 gtcatggggt tcctgaaact gattgagatt gagaacttta agtcgtacaa gggtcgacag 121 attatcggac catttcagag gttcaccgcc atcattggac ccaatggctc tggtaagtca 181 aatctcatgg atgccatcag ctttgtgcta ggtgaaaaaa ccagcaacct gcgggtaaag 241 accctgcggg acctgatcca tggagctcct gtgggcaagc cagctgccaa ccgggccttt 301 gtcagcatgg tctactctga ggagggtgct gaggaccgta cctttgcccg tgtcattgta 361 ggaggttctt ctgagtacaa gatcaacaac aaagtggtcc aactacatga gtacagtgag 421 gaattagaga agttgggcat tctcatcaaa gctcgtaact tcctcgtttt ccagggtgct 481 gtggaatcta ttgccatgaa gaaccccaaa gagaggacag ctctatttga agagattagt 541 cgttctgggg agctggcgca ggagtatgac aagcgaaaga aggaaatggt gaaggctgaa 601 gaggacacac agtttaatta ccatcgcaag aaaaatattg cggctgaacg caaggaagca 661 aagcaggaga aagaagaggc tgaccggtac cagcgcctga aggatgaggt agtacgggct 721 caggtacagc tgcagctctt taagctttac cataatgaag tggaaattga gaagctcaac 781 aaggaactgg cctcaaagaa caaggagatc gagaaggaca agaagcgtat ggacaaggtg 841 gaggatgaac tgaaggagaa gaagaaggag ctgggcaaaa tgatgcggga gcagcagcag 901 attgagaagg agatcaagga gaaggactca gaattgaacc agaagcggcc tcagtacatc 961 aaagccaagg agaacacctc ccacaaaatc aagaagctgg aagcagccaa gaagtctctg 1021 cagaatgctc agaagcacta caagaagcgt aaaggtgaca tggatgagct ggagaaggag 1081 atgctgtcag tggagaaggc tcggcaggag tttgaagaac ggatggaaga agagagtcag 1141 agtcagggca gagatttgac gttggaggag aatcaggtga agaaatacca ccggttgaaa 1201 gaagaagcca gcaagagagc agctaccctg gcccaggagc tggagaaatt caatcgagac 1261 cagaaagctg accaggaccg tctggatctg gaagaacgga aaaaaaaaaa aaaa //