LOCUS       BC080185                1314 bp    mRNA    linear   HUM 11-APR-2007
DEFINITION  Homo sapiens structural maintenance of chromosomes 1A, mRNA (cDNA
            clone IMAGE:6069353), partial cds.
ACCESSION   BC080185
VERSION     BC080185.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1314)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (16-AUG-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 174 Row: h Column: 5
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 30581134.
FEATURES             Location/Qualifiers
     source          1..1314
                     /db_xref="H-InvDB:HIT000265774"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:6069353"
                     /tissue_type="Testis, embryonal carcinoma"
                     /clone_lib="NIH_MGC_92"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..>1314
                     /gene="SMC1A"
                     /gene_synonym="CDLS2"
                     /gene_synonym="DXS423E"
                     /gene_synonym="SB1.8"
                     /gene_synonym="SMC1"
                     /gene_synonym="SMC1alpha"
                     /gene_synonym="SMCB"
                     /db_xref="GeneID:8243"
                     /db_xref="HGNC:HGNC:11111"
                     /db_xref="MIM:300040"
     CDS             64..>1314
                     /gene="SMC1A"
                     /gene_synonym="CDLS2"
                     /gene_synonym="DXS423E"
                     /gene_synonym="SB1.8"
                     /gene_synonym="SMC1"
                     /gene_synonym="SMC1alpha"
                     /gene_synonym="SMCB"
                     /codon_start=1
                     /product="SMC1A protein"
                     /protein_id="AAH80185.1"
                     /db_xref="GeneID:8243"
                     /db_xref="HGNC:HGNC:11111"
                     /db_xref="MIM:300040"
                     /translation="MGFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDA
                     ISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYSEEGAEDRTFARVIVGGS
                     SEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISR
                     SGELAQEYDKRKKEMVKAEEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVR
                     AQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMRE
                     QQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMD
                     ELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQE
                     LEKFNRDQKADQDRLDLEERKKKKK"
BASE COUNT          420 a          266 c          392 g          236 t
ORIGIN      
        1 ggctacctca gttctcgggc gtacggcgcg gcctgtccta ctgccgccgg cgccgcggcc
       61 gtcatggggt tcctgaaact gattgagatt gagaacttta agtcgtacaa gggtcgacag
      121 attatcggac catttcagag gttcaccgcc atcattggac ccaatggctc tggtaagtca
      181 aatctcatgg atgccatcag ctttgtgcta ggtgaaaaaa ccagcaacct gcgggtaaag
      241 accctgcggg acctgatcca tggagctcct gtgggcaagc cagctgccaa ccgggccttt
      301 gtcagcatgg tctactctga ggagggtgct gaggaccgta cctttgcccg tgtcattgta
      361 ggaggttctt ctgagtacaa gatcaacaac aaagtggtcc aactacatga gtacagtgag
      421 gaattagaga agttgggcat tctcatcaaa gctcgtaact tcctcgtttt ccagggtgct
      481 gtggaatcta ttgccatgaa gaaccccaaa gagaggacag ctctatttga agagattagt
      541 cgttctgggg agctggcgca ggagtatgac aagcgaaaga aggaaatggt gaaggctgaa
      601 gaggacacac agtttaatta ccatcgcaag aaaaatattg cggctgaacg caaggaagca
      661 aagcaggaga aagaagaggc tgaccggtac cagcgcctga aggatgaggt agtacgggct
      721 caggtacagc tgcagctctt taagctttac cataatgaag tggaaattga gaagctcaac
      781 aaggaactgg cctcaaagaa caaggagatc gagaaggaca agaagcgtat ggacaaggtg
      841 gaggatgaac tgaaggagaa gaagaaggag ctgggcaaaa tgatgcggga gcagcagcag
      901 attgagaagg agatcaagga gaaggactca gaattgaacc agaagcggcc tcagtacatc
      961 aaagccaagg agaacacctc ccacaaaatc aagaagctgg aagcagccaa gaagtctctg
     1021 cagaatgctc agaagcacta caagaagcgt aaaggtgaca tggatgagct ggagaaggag
     1081 atgctgtcag tggagaaggc tcggcaggag tttgaagaac ggatggaaga agagagtcag
     1141 agtcagggca gagatttgac gttggaggag aatcaggtga agaaatacca ccggttgaaa
     1201 gaagaagcca gcaagagagc agctaccctg gcccaggagc tggagaaatt caatcgagac
     1261 cagaaagctg accaggaccg tctggatctg gaagaacgga aaaaaaaaaa aaaa
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