LOCUS BC078662 5395 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens RAB6B, member RAS oncogene family, mRNA (cDNA clone
MGC:88263 IMAGE:6450986), complete cds.
ACCESSION BC078662
VERSION BC078662.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5395)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5395)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 57 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51036600.
FEATURES Location/Qualifiers
source 1..5395
/db_xref="H-InvDB:HIT000265749"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88263 IMAGE:6450986"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_142"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..5395
/gene="RAB6B"
/db_xref="GeneID:51560"
/db_xref="HGNC:HGNC:14902"
CDS 130..756
/gene="RAB6B"
/codon_start=1
/product="RAB6B protein"
/protein_id="AAH78662.1"
/db_xref="GeneID:51560"
/db_xref="HGNC:HGNC:14902"
/translation="MSAGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQA
TIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQ
QTSKWIDDVRTERGSDVIIMLAGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTG
YNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC"
BASE COUNT 1421 a 1261 c 1313 g 1400 t
ORIGIN
1 acgcgcgcag ccagcccttc cccctccggc tcccgcaccg ccggccgcct cccctcgccc
61 tcctactctc ccctccctgc tccttcgctt tttcctcctc ctcctctccc ggccccggct
121 gccagcacca tgtccgcagg gggagatttt gggaatccac tgagaaaatt caagttggtg
181 ttcttggggg agcagagcgt cgggaagacg tctctgatta cgaggttcat gtacgacagc
241 ttcgacaaca cataccaggc aaccattggg attgacttct tgtcaaaaac catgtacttg
301 gaggaccgca cggtgcgact gcagctctgg gacacagctg gtcaggagag gttccgcagc
361 ctgatcccca gctacatccg ggactccacg gtggctgtgg tggtgtacga catcacaaat
421 ctcaactcct tccaacagac ctctaagtgg atcgacgacg tcaggacaga gaggggcagt
481 gatgttatca tcatgctggc gggcaacaag acggacctgg ctgataagag gcagataacc
541 atcgaggagg gggagcagcg cgccaaagaa ctgagcgtca tgttcattga gaccagtgcg
601 aagactggct acaacgtgaa gcagcttttt cgacgtgtgg cgtcggctct acccggaatg
661 gagaatgtcc aggagaaaag caaagaaggg atgatcgaca tcaagctgga caaaccccag
721 gagcccccgg ccagcgaggg cggctgctcc tgctaatgca gagccgacct gtggcttccc
781 atgacactcc ttgcttgttg tgttgcttcc tattggctag cttcctaagg ggggagggaa
841 ccgagttatc aagatgggag gatttttctt ttctctctgt ctttaggtgt agggtgggat
901 ggggagggag gctggacatc agggatcaca tcactcttaa cggctgttac ttaaacaact
961 attttttggt ttggttgtaa tatattgtac tttattaaga ttgccaaaaa ctgttaaaat
1021 ttaaaaaaaa tttaaatcat gtgtatacaa ttttttgcca gataaaaatg tagtcatttt
1081 tatttgaaag atgtgctttt tgtttttgta tatttgtaaa cttatagaga accttttcca
1141 cacacctcct ccttcctgtt ctctttgaac cattcatcac ctctgccttc ctcctatccc
1201 cagcccaata aattaaaaca attaactgag caaattaatt aggcttcagt ctggggccat
1261 ctggccccac tctctaggcc ctactccagt taaatcaaac attggttgaa cacatcagcc
1321 tctgaaaagg tagctctgac tcttgtcttt ccatggccag agtgggtcgt caacctcgtg
1381 tggagctgag accaaggtct gtgggctcta ggcagcccgg cagcagcccc cagaggaact
1441 gctcccacct ctccttctct ttccctgaaa agccttgaag ggggttgagg gtacaggcaa
1501 ccttgtgttc tctgtgccct cagggactgg cagagcaaga ggccatcaga aggacgaggt
1561 gctgttggca attgcagctg cgtggtgcgt ggtttataga ctggggtgcc atgtgtactt
1621 ctgaaaatat tttaaccagc ccacccagca gtcagtacac atgcctgggc caagtctaag
1681 aaactcagtg tgtgatgttg ggcagtgtgc catcctgaag ccttcctcct ggatgtcagg
1741 gaagctggac cacctggagt tgatcctctg tgatggggag gcgggggggg gggggggtgt
1801 tgtctgcaga accaccacct tgaaagatcc atgttcttag agcctcagct gctaatattg
1861 ttgagtgctt tctggaaaag ctgatttgtt gctatgtttt caccccagtg gcatggcgca
1921 gttgaagtct ttgtggacat atctttgtgg ctactgtggc tgcgctgtgg tcacctgagg
1981 atgtggttca ggtggggtct ccagaaggct gcttgccccc agagagccat ctcttccatt
2041 tttgattcat tcctgagaat ggcttagtcc tgagaatctg caaagtctct gaagagaact
2101 ctctcttccc actaagtgag tctggccaaa atgtaaaccc caccctccct gctgtcattg
2161 gctctccctc caggctgctg ctgggcatgt catagatggg atgaatgacc atctggggta
2221 tggtgggctg aactccacaa ggtcgttgga atgaattttg aaacttctca gaaattaatc
2281 tgaaatggca ggcagtaagt gcagcagaat ctggcaggac tgatatttgt gcagtgggcc
2341 tgccacacac cctctgccta ggaggctgtg tgccagagct catctctagc aaggaattta
2401 tcttcaggtg aagaagagag gaagcaggat cccactgagc acctcttgca gaaggcaagg
2461 accaatgttt gaacgtgttt cagatgtcat gtgtttagtt tttatatgtg tgtacataat
2521 tatatataga gatagacttg tgtatacacc ttccacaaac acatcctcac ggagatacat
2581 gtgctcaatg tatattcttg tttctcctgc tctcaagttg gaacttgcat tgtgataagt
2641 tttggaaatt caaaagtact gcaacgtgtt gaaataagaa atacttaata ttgtcaaata
2701 acttgtgatt gtcttgccat caataaaata atgcatagtt gtgttaaact acaggcaaac
2761 atagcccacg ggaatatctc caccatttct ctatgtactt tatatgcacg ggtgtgcatg
2821 cctgtgtggg ccagtgtccc cccaccatgg gcacaccccc aagtggtgct tgttggaaga
2881 gtgcttactt acctcgagag aatttacagg agtccacatg acagtgtcct gcctggttgg
2941 cagcgggggc catcacctgt ggcctctgag accgccccat ttacaggaat ctgcactggg
3001 tctcagtgaa tgaacgtatg gtagattttt attttcttgg cactaaagat tagctttttt
3061 aaaaaaacat cccataaaac agtagaaact cagttccctt ctcaggggca cacacatcca
3121 aggcaccgtg gactgtgttt ccatcctggc ctagaggagc agtaaaagat agcatttggt
3181 ttgacatggc cttagtgagt cctgcctttc ctagcatgca cacaacatcc tctctttgag
3241 tttgggttct ccccagcccc ttggcctctg aggctgaggg tggcttcctc ccatcctccc
3301 atctcagtgg ttccatggcg ctcccttcgg cacgtgcggt ttccgcccct cccttcctgg
3361 ggtgtggaaa ggcagccaga cctctttttc agaagttgtt ggttccctga tttttgtctt
3421 gagcaggcac catccctgtc cccttgcttg caggtagaat tggcacagag ttaaggttcc
3481 ataataaact gttaggtgct cttgaagaag atgtcatggc attgcctcag caccccagca
3541 agagcattgc atctttgctg aatccagatg ggttagcaga gggcaaattg gaggattcct
3601 ttgaggaaat gttctcaatt gagcaattca gtccctctcc ccaaagacta gacgtgacct
3661 ggcagattag caggatcctc ttggccttct tttttgggga tggtgggagt gaagggggtg
3721 aatcttaaaa gcttatcaac aaagctcctg ttctgcaggc atcaggaaag ttgagtgtaa
3781 gatggaaaaa gcaaacagcc tatttacaag tggaaacaca ttggttctga tcactcctaa
3841 cttgctgggt gatcatacat acatcaacat gaaggtgtga catcagaatc atgagcacca
3901 tggctgcagt tgtgtgatcc aaggctagtt ggcttggtag ctgttggcag cagtttccct
3961 tggtcagagg cctccttgct atctatcgct gctctcttct tgtcatcctt aaacattcag
4021 tcatgttccc aggtctgagg ggagcaatgg ccagaccagt ttcagtatct ctggcaacag
4081 aaacaaggat tgaaatggtg gtagttaaga gtgcagacac atctggggtg caacgtctgc
4141 atcatcctgg tggctagcca gtgcggggag gccctgccct gggataccag ttgtgacaat
4201 aaagggatgg ccctcctggc ttcagcatcc tgcaggtaga gcagcctcat tccttcacaa
4261 gatggaaggc aggtgaggat gtcaggatga gatgggacca ggtagccgag gacagtgagg
4321 catgtctgag ccacttgagg ggcagctgaa cagaaggatg tctgtgtgca tcaaccgagc
4381 agattgtgcg cacactcgtt tccgaactgc ctctccccaa agaatgtgag gcattgtcac
4441 cttgttacag ctatgtgaag cagagctgtc acaacttttc ctgtctacag gcaggaaaac
4501 caggatggag aagggcaact tgcttattaa gatcacccag caagttagga gtgatcagaa
4561 ccagtgaagt ttccattttt catccattgc tgccctgtgt gtgaacaaat gtgactccat
4621 atttattaca cagcaaggac tgctgtgtgt gggtgtgttc ctcagaccat ctctactctt
4681 tttggttagg acactaggtt cttcccagca tatgagtgag aatattggtg gtattttggg
4741 ctcctctact gcacaagggc cagtccccaa gtctactctg attgattgtc atgggcaccc
4801 acacagatca ggacaccctt tgaatttttg tttgacatga actatttagg tgttccaaaa
4861 ccttgggatc tcaatgtgca aactccttgg actccagacc cctgtctggt tggcactccc
4921 agcagtgtgt ggtttcatca ggaaatcctt gcagcagggg tttagatggt tccttcagga
4981 ggtgggaagc ctccatagca ttgaaggcca gcctgcatct cgcggtgtgt gtccacttct
5041 cccctcactt tcccctcacc catcccttta aagtgattgg ctgtgaggag cacagagggt
5101 ggcaattcca tctgttatgg gctcagaaga catagccgcc atgttgattt cacattaaac
5161 tgtgtaaaat gtggaaaaga ctcagcatgt tggtcaaaca ataaactgtc ctaattctca
5221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
5281 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
5341 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//