LOCUS BC078171 2140 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens telomeric repeat binding factor 2, interacting
protein, mRNA (cDNA clone MGC:87941 IMAGE:5760351), complete cds.
ACCESSION BC078171
VERSION BC078171.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2140)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2140)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52627148.
FEATURES Location/Qualifiers
source 1..2140
/db_xref="H-InvDB:HIT000265730"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87941 IMAGE:5760351"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2140
/gene="TERF2IP"
/gene_synonym="DRIP5"
/gene_synonym="RAP1"
/db_xref="GeneID:54386"
/db_xref="HGNC:HGNC:19246"
/db_xref="MIM:605061"
CDS 60..1259
/gene="TERF2IP"
/gene_synonym="DRIP5"
/gene_synonym="RAP1"
/codon_start=1
/product="telomeric repeat binding factor 2, interacting
protein"
/protein_id="AAH78171.1"
/db_xref="GeneID:54386"
/db_xref="HGNC:HGNC:19246"
/db_xref="MIM:605061"
/translation="MAEAMDLGKDPNGPTHSSTLFVRDDGSSMSFYVRPSPAKRRLST
LILHGGGTVCRVQEPGAVLLAQPGEALAEASGDFISTQYILDCVERNERLELEAYRLG
PASAADTGSEAKPGALAEGAAEPEPQRHAGRIAFTDADDVAILTYVKENARSPSSVTG
NALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLKRKAEEDPE
AADSGEPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIH
ITMCDDDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQ
AFLKNSGELEATSAFLASGQRADGYPIWSRQDDIDLQKDDEDTREALVKKFGAQNVAR
RIEFRKK"
BASE COUNT 605 a 457 c 582 g 496 t
ORIGIN
1 gctctgtgtg ccaggcgctc gggagggggt agctcttcta gtagtgctcg gcgtcagaca
61 tggcggaggc gatggatttg ggcaaagacc ccaacgggcc cacccattcc tcgactctgt
121 tcgtgaggga cgacggcagc tccatgtcct tctacgtgcg gcccagcccg gccaagcgtc
181 ggctgtcgac gctcatcctg cacggcggcg gcaccgtgtg ccgagtgcag gagcccgggg
241 ccgtgctgct ggcccagccc ggggaggcgc tggccgaggc ctcgggtgat ttcatctcca
301 cgcagtacat cctggactgc gtggagcgca acgagaggct ggagctggag gcctatcggc
361 tgggccccgc ctcggcggcg gacaccggct cggaagcaaa gcccggggcc ctggccgagg
421 gcgccgcgga gccggagccg cagcggcacg ccgggcggat cgccttcacg gatgcggacg
481 acgtagccat ccttacctac gtgaaggaaa atgcccgctc gcccagctcc gtcaccggta
541 acgccttgtg gaaagcgatg gagaagagct cgctcacgca gcactcgtgg cagtccctga
601 aggaccgcta cctcaagcac ctgcggggcc aggagcataa gtacctgctg ggggacgcgc
661 cggtgagccc ctcctcccag aagctcaagc ggaaggcgga ggaggacccg gaggccgcgg
721 atagcgggga accacagaat aagagaactc cagatttgcc tgaagaagag tatgtgaagg
781 aagaaatcca ggagaatgaa gaagcagtca aaaagatgct tgtggaagcc acccgggagt
841 ttgaggaggt tgtggtggat gagagccctc ctgattttga aatacatata actatgtgtg
901 atgatgatcc acccacacct gaggaagact cagaaacaca gcctgatgag gaggaagaag
961 aagaagaaga aaaagtttct caaccagagg tgggagctgc cattaagatc attcggcagt
1021 taatggagaa gtttaacttg gatctatcaa cagttacaca ggccttccta aaaaatagtg
1081 gtgagctgga ggctacttcc gccttcttag cgtctggtca gagagctgat ggatatccca
1141 tttggtcccg acaagatgac atagatttgc aaaaagatga tgaggatacc agagaggcat
1201 tggtcaaaaa atttggtgct cagaatgtag ctcggaggat tgaatttcga aagaaataat
1261 tggcaagata atgagaaaag aaaaaagtca tggtaggtga ggtggttaaa aaaaattgtg
1321 accaatgaac tttagagagt tcttgcattg gaactggcac ttattttctg accatcgctg
1381 ctgttgctct gtgagtccta gatttttgta gccaagcaga gttgtagagg gggataaaaa
1441 gaaaagaaat tggatgtatt tacagctgtc cttgaacaag tatcaatgtg tttatgaaag
1501 gaagatctaa atcagacagg agttggtcta catagtagta atccattgtt ggaatggaac
1561 ccttgctata gtagtgacaa agtgaaagga aatttaggag gcataggcca tttcaggcag
1621 cataagtaat ctcctgtcct ttggcagaag ctcctttaga ttgggataga ttccaaataa
1681 agaatctaga aataggagaa gatttaatta tgaggccttg aacacggatt atccccaaac
1741 ccttgtcatt tcccccagtg agctctgatt tctagactgc tttgaaaatg ctgtattcat
1801 tttgctaact tagtatttgg gtaccctgct ctttggctgt tctttttttg gagcccttct
1861 cagtcaagtc tgccggatgt ctttctttac ctacccctca gttttcctta aaacgcgcac
1921 acaactctag agagtgttaa gaataatgtt acttggttaa tgtgttattt attgagtatt
1981 gtttgtgcta agcattgtgt tagatttaaa aaattagtgg attgactcca ctttgttgtg
2041 ttgttttcat tgttgaaaat aaatataact ttgtattcga aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaccaaaaaa aaaaaaaaaa aaaaaaaaaa
//