LOCUS BC078159 2113 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens F-box protein 38, mRNA (cDNA clone IMAGE:6154694),
partial cds.
ACCESSION BC078159
VERSION BC078159.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2113)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2113)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: j Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45505154.
FEATURES Location/Qualifiers
source 1..2113
/db_xref="H-InvDB:HIT000265718"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6154694"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2113
/gene="FBXO38"
/gene_synonym="Fbx38"
/gene_synonym="MOKA"
/gene_synonym="SP329"
/db_xref="GeneID:81545"
/db_xref="MIM:608533"
CDS <1..1401
/gene="FBXO38"
/gene_synonym="Fbx38"
/gene_synonym="MOKA"
/gene_synonym="SP329"
/codon_start=1
/product="FBXO38 protein"
/protein_id="AAH78159.1"
/db_xref="GeneID:81545"
/db_xref="MIM:608533"
/translation="QSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEG
DAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGG
SSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVS
ESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDL
VLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERN
RIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANIN
QELIKYEFFPEATRSEEDLKKYPKYPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAA
EPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIF
IHYCDVNGEPVEDDYI"
BASE COUNT 643 a 423 c 481 g 566 t
ORIGIN
1 caaagccccg actttgtaag gacggtgaac agcggcggct cttccgagcc tagccctaca
61 gaagtggatg tgtccaggca gtgtgcctgc tcccccggtg ggtcagagga ctctgaggcc
121 atggaggagg gagatgcaga gagttctgtc tgccccagat gctgctgtca caggccccag
181 gaatcccaaa ggagaactag caggtgttct gatgaggaac gtccttcaac cagccgagcc
241 tgtgttgtga atggcccgga tggtacgaga tccgcctttt cctttaggac tctgccacaa
301 ggggggtctt caggcccagc acatgatgag aggactaatg ggagtggctc tggggctaca
361 ggtgaggaca ggagggggag ctcccagcct gagagttgtg acgtgcagtc taatgaagac
421 taccctcgga ggcccctaac cagggccagg agcagactgt cccatgtact gctggtatct
481 gagtcagaag tagccaaaac aaagccacgt cacgccatga aacggaagcg gacagcagat
541 aaatccacta gtacaagtga tcctgtgatc gaggatgacc atgtgcaggt tcttgtatta
601 aaatccaaga atcttgttgg agtcactatg accaattgtg gaatcacaga tctagtgcta
661 aaagactgtc caaagatgat gttcatccat gctaccaggt gcagggtact aaaacattta
721 aaggtagaaa atgcaccaat tgtaaaccga tttgactatg cacagtgcaa gaaactgaac
781 atggatcagg tactagacca gatactaaga atgccacccg agagaaaccg catcatatac
841 ctacgcccaa tgcagcaggt ggacactcta actttggagc agaagctatt tagtggtccc
901 tacccctatc acatctgtat tatccatgaa ttcagtaacc ctcccaatgt ccggaataag
961 gtgcgcattc gcagctggat ggacactata gcaaacatca atcaagagct cattaaatat
1021 gaattcttcc ctgaagccac tcgaagtgaa gaagacttaa agaaataccc caagtacccc
1081 tgggggagag aaatctatac tttagaaggt gttgtggatg gagctccata ttccatgatt
1141 tctgacttcc cttggctgag gtcattacga gctgcagagc ccaacagctt cgctcgatac
1201 gactttgaag acgatgaaga aagcactatc tatgctccta gaaggaaagg acagctgtct
1261 gcagacatct gtatggaaac aataggagag gaaatttcag agatgcgtca gatgaagaag
1321 ggtgtatttc agcgagtagt ggcaattttt atccactatt gtgatgtcaa tggagagcca
1381 gttgaagatg actacattta attggtccct cctcctttcc agctattttg tcagaaagca
1441 agtagggcca tccagctgcc agagtgctcc acagggactt gaggcatgca gttgggaggt
1501 cctggctcgg tttgctatat agggaatata taaggaacat cgaaattgta tacaaagatt
1561 tgtacataaa aaatatacaa agacgcttcc taaagtacca actttatatc atatgtttat
1621 acaatttaat ttaaaaattc attttaagga agacagataa tttgaaagac ttttgttttt
1681 cttgacttaa ttcatgaagt atcatttttt gactgagtct ccatttactt cattcttaat
1741 gattattgtc atccctttaa atctgtgcct ttttcttctt gagcgaagct gtttgagtaa
1801 acctgttgaa gagtgtttgt gtcttttgtg cttttttgtt gttattaaaa caccaactaa
1861 accttatagt caagacaagg ctctatgttt ctgtacaaag ctgtagttct ttcttagtat
1921 tatagttgcc atgtttctta aaatcaagta aaaagactta tgagcttaaa aaaaagtgag
1981 tttgagaggg aaatggaaaa gtttccagag tatttctagt aatttatttc cacattgaat
2041 tgtgtatatg ctttatcttg aatataaaat aaaagtttat taaaaacttt aaaaaaaaaa
2101 aaaaaaaaaa aaa
//