LOCUS BC078154 4072 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 317, mRNA (cDNA clone MGC:90227
IMAGE:6060418), complete cds.
ACCESSION BC078154
VERSION BC078154.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4072)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4072)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923567.
FEATURES Location/Qualifiers
source 1..4072
/db_xref="H-InvDB:HIT000265713"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90227 IMAGE:6060418"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4072
/gene="ZNF317"
/gene_synonym="KIAA1588"
/db_xref="GeneID:57693"
/db_xref="HGNC:HGNC:13507"
CDS 276..2063
/gene="ZNF317"
/gene_synonym="KIAA1588"
/codon_start=1
/product="zinc finger protein 317"
/protein_id="AAH78154.1"
/db_xref="GeneID:57693"
/db_xref="HGNC:HGNC:13507"
/translation="MAALSPTFATSTQDSTCLQDSEFPVSSKDHSCPQNLDLFVCSGL
EPHTPSVGSQESVTFQDVAVDFTEKEWPLLDSSQRKLYKDVMLENYSNLTSLGYQVGK
PSLISHLEQEEEPRTEERGAHQGACADWETPSKTKWSLLMEDIFGKETPSGVTMERAG
LGEKSTEYAHLFEVFGMDPHLTQPMGRHAGKRPYHRRDYGVAFKGRPHLTQHMSMYDG
RKMHECHQCQKAFTTSASLTRHRRIHTGEKPYECSDCGKAFNDPSALRSHARTHLKEK
PFDCSQCGNAFRTLSALKIHMRVHTGERPYKCDQCGKAYGRSCHLIAHKRTHTGERPY
ECHDCGKAFQHPSHLKEHVRNHTGEKPYACTQCGKAFRWKSNFNLHKKNHMVEKTYEC
KECGKSFGDLVSRRKHMRIHIVKKPVECRQCGKTFRNQSILKTHMNSHTGEKPYGCDL
CGKAFSASSNLTAHRKIHTQERRYECAACGKVFGDYLSRRRHMSVHLVKKRVECRQCG
KAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGEKPYECLVCGKA
FSDHSSLRSHVKTHRGEKLFVSSVWKRLQ"
BASE COUNT 1101 a 1040 c 994 g 937 t
ORIGIN
1 ccattactct ctggagtcga ttgccccgag acacatgggc caaggagggg tcagcggcga
61 attctttcgg cctgttgggg acccctcgtg tccccacgcc agactggacc tcccgtatga
121 acttctcttc gcatcggcgg cggcttccgt cacctccgct cccccgatcc tattcccagt
181 cgtatgccag cttggagagt cacgtgagag caagagagta gctttctggt tgtcctggtg
241 ccctgctcag gcaaactgac tgccattctc tgaggatggc agctctgtcc cccacatttg
301 ccacgtccac ccaggattcc acctgtctcc aggactcaga atttcctgtt tcttcaaaag
361 accattcctg tccccagaat ttggacctgt tcgtgtgcag tggtctggag cctcacacac
421 ccagtgttgg ttcccaggaa tcggtgactt tccaagatgt cgctgtggac tttaccgaga
481 aggagtggcc cttgctggat tcttctcaga gaaaactgta caaagatgta atgctggaga
541 actacagcaa cctcacttca ctggggtatc aggtcggcaa acccagcctc atctcacact
601 tggagcagga ggaggagccg aggacagagg agaggggcgc tcaccagggc gcttgtgcag
661 attgggagac tccatctaaa accaagtggt cacttcttat ggaagatatt tttgggaagg
721 aaacgcccag tggtgtgacg atggaaagag ccggtcttgg agagaagtcc actgaatacg
781 ctcacttgtt cgaagtcttt ggcatggacc ctcatctcac tcagccaatg ggaaggcacg
841 ctggcaagag gccctatcac cgccgcgact atggggtagc gttcaagggc aggccgcacc
901 tcactcagca catgagcatg tacgacggga gaaaaatgca tgaatgtcat cagtgccaaa
961 aagccttcac cacgagcgcg tccctcacac ggcacaggag aatccacacc ggggagaagc
1021 cttacgagtg cagcgactgc gggaaagcct tcaacgaccc ttcagccctt aggagccacg
1081 caagaactca cctcaaagag aagccctttg actgcagtca gtgtggaaat gcattccgga
1141 ccctctcggc cctgaaaatc cacatgcgag ttcacactgg cgagaggcct tacaagtgtg
1201 atcagtgcgg gaaggcttac ggccggagct gccacctcat cgcacacaag agaacgcaca
1261 ccggagagag gccctacgag tgtcacgact gtgggaaagc tttccagcac ccctcccacc
1321 tcaaagagca cgtgaggaat cacacggggg agaagcccta cgcgtgcacg cagtgcggca
1381 aagccttccg ctggaagtcc aactttaatt tgcacaagaa gaaccacatg gtggagaaga
1441 cctacgaatg taaagaatgc gggaaatcct ttggcgatct cgtgtcccgg aggaaacaca
1501 tgaggattca catcgtcaag aaacccgtgg aatgtcggca gtgcgggaag accttccgaa
1561 accagtccat ccttaagact cacatgaact ctcacactgg agagaaacca tacgggtgcg
1621 atctctgcgg gaaagctttc agcgcgagtt caaacctcac cgcacacagg aagatacaca
1681 cgcaagagag acgctacgaa tgcgccgcct gcgggaaagt cttcggtgac tatttatccc
1741 ggcggaggca catgagcgtt caccttgtaa agaaacgagt tgagtgtagg cagtgtggca
1801 aggccttcag gaaccagtca acgctgaaga cgcacatgcg aagccacacg ggggagaaac
1861 cgtacgaatg cgatcactgt gggaaggcct tcagcatagg ctccaacctg aatgtgcaca
1921 ggcggatcca caccggggag aagccctacg aatgccttgt ctgcgggaaa gccttcagcg
1981 accactcatc cctcaggagc cacgtgaaaa ctcaccgggg agagaagctc tttgtgtcat
2041 ccgtgtggaa aaggctccag tgagcgcgcc tgctttagag acacaggatg attcagaccg
2101 gaaacagacc tcgtgggtgt aagaggaagc ctctgtgagc tcgcacctta ctgggtgcaa
2161 aagaatccac ggaacttggg agaagtccag ttcctgtaaa aactgggaag acgaggcgtt
2221 ctcatcccat aggaggtttg tgagaactca cgccgggggt gaaaatgtac gtctgtagca
2281 tggagaagcc ttcagggtac attcagctct taacaaacac aggaggactt aatggcagct
2341 tggcatttaa tgtcaaaatc caagccgtgg catttaatgt caaaatgact tcagaccact
2401 tctagccttc tgggcccatg agtaataatg agcacactag ggagcatctc tgtaaacaca
2461 gtggctgggg aaacccttcc tagtctcact tgattcctca tgacggaaat cacactaaag
2521 agagaaatca gtgaagtaag gaacgtggaa ggtcatgaat gggccgcaaa ccacggccag
2581 ctgcttgtct ttgtatggct tgccagctaa caatagtggt tccatcttta aggaagaaga
2641 atgtttgatg gagaaaattt gtggccaatg aagtctgaaa tacttcctgt catctgcccc
2701 tttccagaaa aacttggccg acccttggtc tacagcacgg gttctcagtc gggcgacgat
2761 ttggctgtct aggcgtcatt tggcaatgtc tagagacatt tttggtagtt agaatggggg
2821 gaagatactc ctgacttgta ataagaagac atcagagatg ctgctaagtc ggctccagca
2881 cacaggagcc ccccacaacg aagagttagt gcccccaaac gtcactgttg ctgaggttga
2941 aaataatcat gcagtcattc ctcaattact gcctgcagca attcctccat ttttatgaat
3001 cttgtgagca cttacgctag gagaaatttc ttttacaaaa cttttaaaat acaattagtg
3061 ctgataattc ctatgtggaa atgattccag ccatggtccc ctcacttgag catgtgaata
3121 ttctcacgga gagaagcccc agcgagattt tccggtgaat acgggattgc acttactctt
3181 tcatcacgga aacagacccc ccgagagaag ccccaacgag attttccggt gaatacggga
3241 ctgcacgtac tctctcatca tgaaaacaga gccccgttca taaatttttc atctttattt
3301 ttaaggttat actcctctaa ataaccctta agcctcatca agaaaggttt gtttatagta
3361 tttttactat agcttcatcc ttgataacgt cctaatttcc ttctggacaa cctccttgac
3421 caatggcata ttgagatcta tgtgacatga ggatatttct cagtaccact ttgttactgg
3481 tacctgatgc acacggattg cgaccagagc atgatgcctc catcaagtgg taatatgttt
3541 gcagcctgct gtccagccaa gagtgacaga tacttctagt gacttccccg gtatccactc
3601 tcatcttctt ccaatatcaa gagaatccag gttctgtcag attagtaagg tgtgctaatc
3661 taaattttaa aaaatctctt acaggttttc ttgcagctgg taccatccat gtctcacagc
3721 cctggccact gacagatcag cagatgtcac cacatgggct tctgagaaag ctcttgaatg
3781 gggatcgttc ttaaacatga attcctccct gtatgttttg ttctttgctt tacttttcac
3841 cttgcaaaga gatccagtac ctagtattgg aagatccacc ttaacgaccg tgcatatgaa
3901 aaccacagtc taaggaagtg actgcagaaa gctcacagcg accctggcct cccctgtggc
3961 ctctttgagt gtctgcagca gccctggact tccagacttc tatcacatga gaaaaaataa
4021 aactgattat tggtttaagc tgcaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//