LOCUS BC078150 4599 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens salt-inducible kinase 2, mRNA (cDNA clone
IMAGE:6066794), partial cds.
ACCESSION BC078150
VERSION BC078150.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4599)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4599)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: h Column: 7.
FEATURES Location/Qualifiers
source 1..4599
/db_xref="H-InvDB:HIT000265709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6066794"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..4599
/gene="SIK2"
/gene_synonym="LOH11CR1I"
/gene_synonym="QIK"
/db_xref="GeneID:23235"
/db_xref="HGNC:HGNC:21680"
/db_xref="MIM:608973"
CDS <1..2137
/gene="SIK2"
/gene_synonym="LOH11CR1I"
/gene_synonym="QIK"
/codon_start=2
/product="SIK2 protein"
/protein_id="AAH78150.1"
/db_xref="GeneID:23235"
/db_xref="HGNC:HGNC:21680"
/db_xref="MIM:608973"
/translation="PFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKR
LTIAQIKEHKWMLIEVPVQRPVLYPQEQENEPSIGEFNEQVLRLMHSLGIDQQKTIES
LQNKSYNHFAAIYFLLVERLKSHRSSFPVEQRLDGRQRRPSTIAEQTVAKAQTVGLPV
TMHSPNMRLLRSALLPQASNVEAFSFPASGCQAEAAFMEEECVDTPKVNGCLLDPVPP
VLVRKGCQSLPSNMMETSIDEGLETEGEAEEDPAHAFEAFQSTRSGQRRHTLSEVTNQ
LVVMPGAGKIFSMNDSPSLDSVDSEYDMGSVQRDLNFLEDNPSLKDIMLANQPSPRMT
SPFISLRPTNPAMQALSSQKREVHNRSPVSFREGRRASDTSLTQGIVAFRQHLQNLAR
TKGILELNKVQLLYEQIGPEADPNLAPAAPQLQDLASSCPQEEVSQQQESVSTLPASV
HPQLSPRQSLETQYLQHRLQKPSLLSKAQNTCQLYCKEPPRSLEQQLQEHRLQQKRLF
LQKQSQLQAYFNQMQIAESSYPQPSQQLPLPRQETPPPSQQAPPFSLTQPLSPVLEPS
SEQMQYSPFLSQYQEMQLQPLPSTSGPRAAPPLPTQLQQQQPPPPPPPPPPRQPGAAP
APLQFSYQTCELPSAASPAPDYPTPCQYPVDGAQQSDLTGPDCPRSPGLQEAPSSYDP
LALSELPGLFDCEMLDAVDPQHNGYVLVN"
BASE COUNT 1213 a 1192 c 1099 g 1095 t
ORIGIN
1 gccctttgat ggaccgactc ttccaatttt gaggcagagg gttctggaag gaagattccg
61 gattccgtat ttcatgtcag aagattgcga gcaccttatc cgaaggatgt tggtcctaga
121 cccatccaaa cggctaacca tagcccaaat caaggagcat aaatggatgc tcatagaagt
181 tcctgtccag agacctgttc tctatccaca agagcaagaa aatgagccat ccatcgggga
241 gtttaatgag caggttctgc gactgatgca cagccttgga atagatcagc agaaaaccat
301 tgagtctttg cagaacaaga gctataacca ctttgctgcc atttatttct tgttggtgga
361 gcgcctgaaa tcacatcgga gcagtttccc agtggagcag agacttgatg gccgccagcg
421 tcggcctagc accattgctg agcaaacagt tgccaaggca cagactgtgg ggctcccagt
481 gaccatgcat tcaccgaaca tgaggctgct gcgatctgcc ctcctccccc aggcatccaa
541 cgtggaggcc ttttcatttc cagcatctgg ctgtcaggcg gaagctgcat tcatggaaga
601 agagtgtgtg gacactccaa aggtcaatgg ctgtctgctt gaccctgtgc ctcctgtcct
661 ggtgcggaag ggatgccagt cactgcccag caacatgatg gagacctcca ttgacgaagg
721 gctggagaca gaaggagagg ccgaggaaga ccccgctcat gcctttgagg catttcagtc
781 cacacgcagc gggcagagac ggcacactct gtcagaagtg accaatcaac tggtcgtgat
841 gcctggggca gggaaaattt tctccatgaa tgacagcccc tcccttgaca gtgtggactc
901 tgagtatgat atggggtctg ttcagaggga cctgaacttt ctggaagaca acccttccct
961 taaggacatc atgttagcca atcagccttc accccgcatg acatctccct tcataagcct
1021 gagacctacc aacccagcca tgcaggctct gagctcccag aaacgagagg tccacaacag
1081 gtctccagtg agcttcagag agggccgcag agcatcagat acctccctca cccagggaat
1141 tgtagcattt agacaacatc ttcagaatct ggctagaacc aaaggaattc tagagttgaa
1201 caaagtgcag ttgttgtatg aacaaatagg accggaggca gaccctaacc tggcgccggc
1261 ggctcctcag ctccaggacc ttgctagcag ctgccctcag gaagaagttt ctcagcagca
1321 ggaaagcgtc tccactctcc ctgccagcgt gcatccccag ctgtccccac ggcagagcct
1381 ggagacccag tacctgcagc acagactcca gaagcccagc cttctgtcaa aggcccagaa
1441 cacctgtcag ctttattgca aagaaccacc gcggagcctt gagcagcagc tgcaggaaca
1501 taggctccag cagaagcgac tctttcttca gaagcagtct caactgcagg cctattttaa
1561 tcagatgcag atagcagaga gctcctaccc acagccaagt cagcagctgc cccttccccg
1621 ccaggagact ccaccgcctt ctcagcaggc cccaccgttc agcctgaccc agcccctgag
1681 ccccgtcctg gagccttcct ccgagcagat gcaatacagc cctttcctca gccagtacca
1741 agagatgcag cttcagcccc tgccctccac ttccggtccc cgggctgctc ctcctctgcc
1801 cacgcagcta cagcagcagc agccgccacc gccaccaccc cctccaccac cacgacagcc
1861 aggagctgcc ccagccccct tacagttctc ctatcagact tgtgagctgc caagcgctgc
1921 ttcccctgcg ccagactatc ccactccctg tcagtatcct gtggatggag cccagcagag
1981 cgacctaacg gggccagact gtcccagaag cccaggactg caagaggccc cctccagcta
2041 cgacccacta gccctctctg agctacctgg actctttgat tgtgaaatgc tagacgctgt
2101 ggatccacaa cacaacgggt atgtcctggt gaattagtct cagcacagga attgaggtgg
2161 gtcaggtgaa ggaagagtgt atgttcctat ttttattcca gccttttaaa tttaaagctt
2221 attttcttgc cctctcccta acggggagaa atcgagccac ccaactggaa tcagagggtc
2281 tggctggggt ggatgttgct tcctcctggt tctgccccac cacaaagttt tctgtggcaa
2341 gtgctggaac atagttgtag gctgaggctc ctgcccttcg gtcgagtgga gcaagctctc
2401 gagggcagca ctgacaaatg tgttcctaag aagacattca gacccaggtc ttatgcagga
2461 ttacatccgt ttattatcaa gggcaacctt ggtgaaagca gaaagggtgt gtgctattgc
2521 atatatatgg gggaaaaggc aatatatttt tcactgaagc tgagcaacca catattgcta
2581 caaggcaaat caagaagaca tcaggaaatc agatgcacag gaaataaagg aaagctgtgc
2641 tttgtcattg aatcctaagt tcttagctgc tgatgcaagt tgtcccccaa ggccatcaca
2701 aagcagtggg gcatgagctg tgtttcaggg gccactaaat aacagctggt actgacccca
2761 gaaaccgcct tcatctccat tcggaagcag gtgacacacc ccttcagaag gtgccctggg
2821 ttgccgagtg tcagaatata ctcaggactc cagaggtgtc acacgtggaa ctgacaggag
2881 acccgccacc gtggaggcag ggggcaagaa actcaagaac gcatcaagag caccagccct
2941 gggccaggga agacaggctc ttcctgcagt ttctcgtgga cactgctggc ttgcgggcag
3001 tcggtctcca gggtacctgt tgtctctttt ccgatgtaat aactactttg accttacact
3061 atatgttgct agtagtttat tgagctttgt atatttggac agtttcatat agggcttaga
3121 gattttaagg acatgataaa tgaacttttc tgtcccatgt gaagtggtag tgcggtgcct
3181 ttcccccaga tcatgcttta attctttctt ttctgtagaa accaacagtt tccatttatg
3241 tcaatgctaa atccaaagtc acttcagagt ttgttttcca ccatgtggga atcagcattc
3301 ttaatttcgt taaagttttg acttgtaatg aaatgttcaa gtattacagc aatattcaaa
3361 gaaagaacca cagatgtgtt aaccatttaa gcagatcatc tgccaaacat tatattacta
3421 ataaaactta accaacactt acaattcagt catcaaagta agtaaaaatt agatgctaca
3481 gctagctaac tgtatcccta gaaatgatga ataatttgcc atttggacag ttaacatcca
3541 ggtgttacaa agtcagtgtt aattctaaag atgatcattt ctgcccttta gaatggcttg
3601 tcccatcagc agatgaatgt gttaagcaca aagcatcttc cttaaagcac aaagagaggg
3661 actaactgat gctgcatcta gaaaacacct ttaagttgcc tttcctcttt gtagttagcg
3721 ttcaggcagg tgacgtgtgg aaagtctagg gggttccatt ctggccatgc gagcccagct
3781 cctaccaacg tcggtaactt gagcagtccc tgttgctggc cagagactgc ctggtcgcca
3841 gcgctcacca tgggtgccag gatgcttcgc agaggcactg tgctcacggt tggacttggt
3901 gtcagtggga aagggcagtg tggggactgt catttttgtg atttaataac acacagtgaa
3961 aatccaggaa gaatgaatta agcttcttct gggagttgtt tattcctgct cgtgcttaag
4021 attgatgatt tcgtgaaata aagaacatca tttcatttaa gagatcattt cattaagatc
4081 tctaatctgt tttgagtctt tacaaaatag ccagttataa aatggggctt gatttgttta
4141 gactgaagga agacgttttc ccaaaatata ctacagaagt gctacaatat ttgcgatatt
4201 aaaatgcctg cagattgaaa atgggggcca ctcatttcag aactgcagga atggtgtagt
4261 tacagatcga cataaactcc tgccccccaa caatgccatg agctgcttag cccaggagac
4321 ctgggagcta tggcaggacg gttaggccag ccgatgaggg actgcagaga ggctactgga
4381 aggttaagga cccagagaga aatcgagagg tgccctacag cagccaggcc tatcaggatc
4441 cgtcacacac ggcagcggcg tggacaccgg cctgatgcag agcgtgaccc ctcctgctgg
4501 gacctgtgtt gtaagctcct atttgcttat cttgtttatt tcaagcagaa atcaataaat
4561 tccataaccc tctgtattga ctgcaaaaaa aaaaaaaaa
//