LOCUS BC077077 5490 bp mRNA linear HUM 20-JUL-2004
DEFINITION Homo sapiens dihydropyrimidinase-like 3, mRNA (cDNA clone MGC:88094
IMAGE:6177053), complete cds.
ACCESSION BC077077
VERSION BC077077.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5490)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5490)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: l Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..5490
/db_xref="H-InvDB:HIT000265680"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88094 IMAGE:6177053"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..5490
/gene="DPYSL3"
/gene_synonym="CRMP-4"
/gene_synonym="CRMP4"
/gene_synonym="DRP-3"
/gene_synonym="DRP3"
/gene_synonym="ULIP"
/db_xref="GeneID:1809"
/db_xref="MIM:601168"
CDS 199..2253
/gene="DPYSL3"
/gene_synonym="CRMP-4"
/gene_synonym="CRMP4"
/gene_synonym="DRP-3"
/gene_synonym="DRP3"
/gene_synonym="ULIP"
/codon_start=1
/product="DPYSL3 protein"
/protein_id="AAH77077.1"
/db_xref="GeneID:1809"
/db_xref="MIM:601168"
/translation="MASGRRGWDSSHEDDLPVYLARPGTTDQVPRQKYGGMFCNVEGA
FESKTLDFDALSVGQRGAKTPRSGQGSDRGSGSRPGIEGDTPRRGQGREESREPAPAS
PAPAGVEIRSATGKEVLQNLGPKDKSDRLLIKGGRIVNDDQSFYADIYMEDGLIKQIG
DNLIVPGGVKTIEANGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAALAGGTTMI
IDHVVPEPESSLTEAYEKWREWADGKSCCDYALHVDITHWNDSVKQEVQNLIKDKGVN
SFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQTRMLKMGITGP
EGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFGEP
ITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTF
STAQKAIGKDNFTAIPEGTNGVEERMSVIWDKAVATGKMDENQFVAVTSTNAAKIFNL
YPRKGRISVGSDSDLVIWDPDAVKIVSAKNHQSAAEYNIFEGMELRGAPLVVICQGKI
MLEDGNLHVTQGAGRFIPCSPFSDYVYKRIKARRKMADLHAVPRGMYDGPVFDLTTTP
KGGTPAGSARGSPTRPNPPVRNLHQSGFSLSGTQVDEGVRSASKRIVAPPGGRSNITS
LS"
BASE COUNT 1372 a 1362 c 1426 g 1330 t
ORIGIN
1 tgctccgcgc gctagctggc tgtgtggctc gctggctcgc tagggacaag caggaatcgg
61 agcagcactg ccgcctctgg cgcgaaggct caggcgcctc ctcccgccac agtcactgtg
121 gctcggcgca cgctgccggc ggctgccctt tccgcctctg gggaagaaaa acccgcgggc
181 cgctttcgtg cttgaaccat ggcctcgggc cggaggggct gggacagctc ccacgaagac
241 gatctgcccg tgtacctggc caggccgggc accacggacc aggtcccgcg gcagaaatac
301 ggcggcatgt tctgcaacgt ggagggcgcc ttcgagagca agacgctgga tttcgatgcc
361 ctcagcgtgg ggcagcgggg cgcgaagact cctcggagcg gccagggcag cgaccgagga
421 tcggggagtc ggcccgggat cgagggggac accccgcgca ggggccaagg ccgggaagag
481 agcagggagc ccgcgcccgc ctcccccgcc cccgccgggg tagagatccg gagcgccacc
541 ggcaaagagg tgttgcagaa cctcggcccc aaggacaaga gtgaccgtct ccttatcaag
601 ggaggcagaa tcgtcaatga tgatcagtcc ttttatgctg atatttacat ggaagatggc
661 ttaataaaac aaattggaga caatctgatt gttcctggag gagtgaagac cattgaagcc
721 aatgggaaga tggtgatccc tggaggcatc gatgtccata ctcacttcca gatgccatat
781 aagggaatga ccacagtaga tgacttcttc caagggacaa aggcggcctt agcaggtggc
841 accaccatga tcattgacca tgtggtgcct gagcctgagt ccagcctgac tgaggcctat
901 gagaaatgga gagagtgggc tgatgggaag agttgctgtg actatgccct gcatgtggac
961 atcacccact ggaatgacag cgtcaagcag gaagtgcaga acctcatcaa ggacaaaggg
1021 gttaactcct tcatggttta tatggcttat aaggatttgt atcaagtatc taacacagag
1081 ctctatgaga tcttcacctg cctgggagag ctgggggcca ttgctcaagt tcatgctgag
1141 aatggggata tcattgccca ggagcaaacc cgcatgttga aaatggggat aactggccca
1201 gaaggccatg tactgagcag gccagaagag ctggaagctg aggctgtgtt ccgtgccatc
1261 accattgcca gccaaaccaa ttgccctctc tacgtcacaa aggtcatgag caagagtgca
1321 gctgacctca tctcacaagc caggaaaaaa ggaaatgtag tctttggtga gcccatcact
1381 gccagcctcg gcatagatgg aacccattat tggagcaaga actgggccaa ggcggctgca
1441 tttgtgacat ccccacccct gagccctgac ccaactactc cggactacat caactccttg
1501 ctggccagcg gggatctgca gctatctggg agtgcccact gcaccttcag cactgcccag
1561 aaagcaattg ggaaggacaa cttcacagcc attcctgagg gcaccaatgg tgtggaggag
1621 cggatgtctg tcatctggga caaggctgtg gccacaggga aaatggacga aaaccagttc
1681 gtggctgtga caagcacaaa cgctgccaag atcttcaacc tgtatccccg caagggaaga
1741 atatctgtgg gttctgacag cgacctcgtc atctgggatc cagatgctgt gaagatcgtc
1801 tctgccaaga accaccagtc tgcggcagag tacaacatct ttgaagggat ggagctgcgc
1861 ggggctcctc tggttgtcat ctgccagggc aagatcatgc tggaagatgg caacctgcac
1921 gtgacccagg gggctggccg cttcataccc tgcagcccgt tctccgacta tgtctacaag
1981 cgcattaaag cacggaggaa gatggcagac ctgcatgccg tcccaagggg catgtacgat
2041 gggcctgtgt ttgacctgac caccaccccc aaaggtggca cccccgcagg ctctgctcgg
2101 ggctctccta ctcggccgaa cccacctgtg aggaatcttc atcagtcggg atttagcctg
2161 tcaggcaccc aagtggatga gggggttcgc tcagccagca agcgcatcgt ggcgccccca
2221 ggcggccgtt ctaatatcac atctctgagt taagcaagcc ttcctcaaag agaggggcag
2281 aagcaagaag agattgtttt gaagccaaaa tggtacaccg atatttaaga aggaaagcga
2341 atccaaacgg ttgtgatcta aagaatcaat aagcctcaag ccttatgttt ctccaatgtt
2401 acgctcgctt gcctagcttt acgaatattg ctttgttttc tgtttatgca tagccttgat
2461 ttgtttgact cccctccccc catttacatg catgcaatca gacaggccac taaggtaaaa
2521 gagtctgctc tatcatagtg ttgagagcgt gtgtagtgct gcatcttatg acaaggggac
2581 agacaagctg ggacgtcagg gaaatgaaca aaagggacgc aggttatttg gggtgagtgg
2641 gtggtgggag cctggagcaa ggtggagggt gcagaggggc tggggtaggg catgtaggag
2701 ggaggtgggt gggtcaggtg agtggaaggg gtgttgtata ttgtgttgat gacgtacgtt
2761 atttccatgg aagatagccg ctgtggcagc tgtcacatca ccacagctcc ctagggtctg
2821 ccgagaaggc aggcagtctt tgggttctgt tctttgtcac gtcccctaca agtaaatttt
2881 gtttctttga acgtttatta aaatgccaag acccaaccat ttcttccacc tgcttgattg
2941 tgccagtgtt tgctcaggcc tctttcttag tgttgctttc aaatccttct ctttcctggg
3001 ttgggaaggc caggcaggga cagagcaaat gacacttctc ttcctcttgc cctccctgcc
3061 tctttggtgc tcttaaaagc cagcagctga gaacatagca caggcccacg tggtgagggc
3121 acccacagct taaagacgct tccttctaaa cacggcgagg tcacctctca ctcttctgtc
3181 tttgcaaacc gagaagagtg gcatgcttct ggcatcccaa gtcaggattt tagctcagat
3241 gaggcagaat gaagggcctc tcttacaggc agtttgtgtt tgattctctc gatcctggca
3301 catccatgat aaataggagt ttttgaaagt tggttttatt aggtgttccc taatttttac
3361 cgtaataggt catctcagct tatatgaaag tcaagtgggg aactgggaaa gccaaagtca
3421 gtcttgagca gagggagcac attttgtgga cctggttcca cctttccatt ccaaaccacc
3481 tgtttcccct tccattagca gaaactctgg gggaactttg tgtctcagtc ctagaatctc
3541 cccaagtgag tggaagtgac atgatgcagt cttcctcatg gggcacctga aagaaattag
3601 tgtgggtgct tcgatctacc ttgtctgtca gagttgaata tctctttccc tatcatgctg
3661 cttctgaaaa ttcagttttg gagcaagtcc tgtgagcaag ataagaatct atagaaccaa
3721 gatgctcatt ttcagaagaa atatgttcaa cctgggatca gacttccatg ctctggggaa
3781 tccaagtggt agcacctgta accctgtgta ctaagtgctt tgaagagaag agcaggcctc
3841 agacaccttt taattgctta ggagaaacca ttgtctctga ctgcaggttt gaataagttg
3901 aagaccagag aaaagtacac actgggctac aaaggaattt ggagatagcc aaggaacagg
3961 atttccccta gcaagctacc ttctgttcaa atcatgaaaa aagactattt ccccttagaa
4021 tagggaagct tgctatttta aagctcttgt agtgcttttc ttttaaggga gatgtagtaa
4081 aagggaaaat gtagctctta gtttacactt caaagatgtg ggggtctttc agagaactaa
4141 gaataacagt tttatgtgca gagagagttt gccagatctg aagcatatac ctcattgact
4201 aggctgttac tttgggatag gttgcagtac cagccacagc cagcagatag aggaaaagac
4261 acacataaac tcgcttctga gcgtccactt ctgcactctc tgctctgctg ttactcagcc
4321 cctgagtctg actcatctct gcacaacctc tctgtgccat gaagataagt cttccatggc
4381 caaatcggtc atccgcactg cccttgggac ttccgaagtg aaccattcca ccagaacctt
4441 tgattctgca caagatttcc ttgctctggg aacaaccccc aaatgccctt gggaggaaca
4501 acatgagctc aggaagcctc tctttcttca cttaccatta ctaactctcc aagcatagaa
4561 atccctggga attgcgagaa taactcccac tattttaaaa tttatattca gatttgtttc
4621 gtttcataag acacatcaaa caggcctata caaaaggttt aggaaaagaa aacaatggtg
4681 agtcccggcc ctcttcgaat tcactggcac ctcatgcaag tgtaggaagg cacgctggat
4741 cgtctatctg attccaaagc tgtcctttgc catctcatcc cttggcctgc cccccaaccc
4801 tgaggatgcc cctgccatcc ccccaacctc ctcatattgc ctctgaaccc agatggcaat
4861 ccatcccggt tctctctgag ggccacgggc ttgggtagtg gaaagggtgt ttgggaaatt
4921 gttaaatcag ttacccgtag tagagctatt tcttgtactt ctaagttttc tagaagtgga
4981 aggattgtag tcatcctgaa aatgggttta cttcaaaatc cctcagcctt gttcttcacg
5041 actgtctata ctgagagtgt catgtttcca caaagggctg acacctgagc ctggattttc
5101 actcatccct gagaagccct ttccagtagg gtgggcaatt cccaacttcc ttgccacaag
5161 cttcccaggc tttctcccct ggaaaactcc agcttgagtc ccagatacac tcatgggctg
5221 ccctgggcag ccagcattca ttgtaagttc cctctttgaa aactggtgtg tgggtgttca
5281 gttctgtgtc tggtgggtat ggacagacag taatctcctg tgatctgtgc tagctgtgag
5341 gcagctctgg aacgtgaaga gctgtttggt ttgaaccgtg aacaaaactg tgttttgagt
5401 ttagctgaca ttaaagaaaa aagttcatca cgtgactgtt aatgtaaacc tggttattaa
5461 aataactatg aaattaaaaa aaaaaaaaaa
//