LOCUS BC075847 3284 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens myosin phosphatase Rho interacting protein, mRNA (cDNA
clone IMAGE:6377500), partial cds.
ACCESSION BC075847
VERSION BC075847.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3284)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3284)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: m Column: 9.
FEATURES Location/Qualifiers
source 1..3284
/db_xref="H-InvDB:HIT000265660"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6377500"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3284
/gene="MPRIP"
/gene_synonym="M-RIP"
/gene_synonym="p116Rip"
/gene_synonym="RHOIP3"
/db_xref="GeneID:23164"
/db_xref="HGNC:HGNC:30321"
CDS <1..2501
/gene="MPRIP"
/gene_synonym="M-RIP"
/gene_synonym="p116Rip"
/gene_synonym="RHOIP3"
/codon_start=3
/product="MPRIP protein"
/protein_id="AAH75847.1"
/db_xref="GeneID:23164"
/db_xref="HGNC:HGNC:30321"
/translation="EKVPTTKSTLWQEEMRTKDQPDGSSLSPAQSPSQSQPPAASSLR
EPGLESKEEESAMSSDRMDCGRKVRVESGYFSLEKTKQDLKAEEQQLPPPLSPPSPST
PNHRRSQVIEKFEALDIEKAEHMETNAVGPSPSSDTRQGRSEKRAFPRKRDFTNEAPP
APLPDASASPLSPHRRAKSLDRRSTEPSVTPDLLNFKKGWLTKQYEDGQWKKHWFVLA
DQSLRYYRDSVAEEAADLDGEIDLSACYDVTEYPVQRNYGFQIHTKEGEFTLSAMTSG
IRRNWIQTIMKHVHPTTAPDVTSSLPEEKNKSSCSFETCPRPTEKQEAELGEPDPEQK
RSRARERRREGRSKTFDWAEFRPIQQALAQERVGGVGPADTHEPLRPEAEPGELERER
ARRREERRKRFGMLDATDGPGTEDAALRMEVDRSPGLPMSDLKTHNVHVEIEQRWHQV
ETTPLREEKQVPIAPVHLSSEDGGDRLSTHELTSLLEKELEQSQKEASDLLEQNRLLQ
DQLRVALGREQSAREGYVLQATCERGFAAMEETHQKKIEDLQRQHQRELEKLREEKDR
LLAEETAATISAIEAMKNAHREEMERELEKSQRSQISSVNSDVEALRRQYLEELQSVQ
RELEVLSEQYSQKCLENAHLAQALEAERQALRQCQRENQELNAHNQELNNRLAAEITR
LRTLLTGDGGGEATGSPLAQGKDAYELEVLLRVKESEIQYLKQEISSLKDELQTALRD
KKYASDKYKDIYTELSIAKAKADCDISRLKEQLKAATEALGEKSPDSATVSGYDIMKS
KSNPDFLKKDRSCVTRQLRNIRSKSVIEQVSWDT"
BASE COUNT 818 a 908 c 985 g 573 t
ORIGIN
1 ctgagaaagt ccccaccacc aagtccacac tctggcagga agaaatgagg accaaggacc
61 agccagatgg cagcagcctg agtccagctc agagtcccag ccagagccag cctcctgctg
121 ccagctccct gcgggaacct gggctagaga gcaaagaaga ggagagcgcc atgagtagcg
181 accgcatgga ctgtggccgc aaagtccggg tggagagcgg ctacttctct ctggagaaga
241 ccaaacagga cttgaaggct gaagaacagc agctgccccc gccgctctcc cctcccagcc
301 ccagcacccc caaccacagg aggtcccagg tgattgaaaa gtttgaggcc ttggacattg
361 agaaggcaga gcacatggag accaatgcag tggggccctc accatccagc gacacacgcc
421 agggccgcag cgagaagagg gcgttcccta ggaagcggga cttcaccaat gaagcccccc
481 cagctcctct cccagacgcc tcggcttccc ccctgtctcc acaccgaaga gccaagtcac
541 tggacaggag gtccacggag ccctccgtga cgcccgacct gctgaatttc aagaaaggct
601 ggctgactaa gcagtatgag gacggccagt ggaagaaaca ctggtttgtc ctcgccgatc
661 aaagcctgag atactacagg gattcagtgg ctgaggaggc agccgacttg gatggagaaa
721 ttgacttgtc cgcatgttac gatgtcacag agtatccagt tcagagaaac tatggcttcc
781 agatacatac aaaggagggc gagtttaccc tgtcggccat gacatctggg attcggcgga
841 actggatcca gaccatcatg aagcacgtgc acccgaccac tgccccggat gtgaccagct
901 cgttgccaga ggaaaaaaac aagagcagct gctcttttga gacctgcccg aggcctactg
961 agaagcaaga ggcagagctg ggggagccgg accctgagca gaagaggagc cgcgcacggg
1021 agcggaggcg agagggccgc tccaagacct ttgactgggc tgagttccgt cccatccagc
1081 aggccctggc tcaggagcgg gtgggcggcg tggggcctgc tgacacccac gagcccctgc
1141 gccctgaggc ggagcctggg gagctggagc gggagcgtgc acggaggcgg gaggagcgcc
1201 gcaagcgctt cgggatgctc gacgccacag acgggccagg cactgaggat gcagccctgc
1261 gcatggaggt ggaccggagc ccagggctgc ctatgagcga cctcaaaacg cataacgtcc
1321 acgtggagat tgagcagcgg tggcatcagg tggagaccac acctctccgg gaagagaagc
1381 aggtgcccat cgcccccgtc cacctgtctt ctgaagatgg gggtgaccgg ctctccacac
1441 acgagctgac ctctctgctc gagaaggagc tggagcagag ccagaaggag gcctcagacc
1501 ttctggagca gaaccggctc ctgcaggacc agctgagggt ggccctgggc cgggagcaga
1561 gcgcccgtga gggctacgtg ctgcaggcca cgtgcgagcg agggtttgca gcaatggaag
1621 aaacgcacca gaagaagatt gaagatctcc agaggcagca ccagcgggag ctagagaaac
1681 ttcgagaaga gaaagaccgc ctcctagccg aggagacagc ggccaccatc tcagccatcg
1741 aagccatgaa gaacgcccac cgggaggaaa tggagcggga gctggagaag agccagcggt
1801 cccagatcag cagcgtcaac tcggatgttg aggccctgcg gcgccagtac ctggaggagc
1861 tgcagtcggt gcagcgggaa ctggaggtcc tctcggagca gtactcgcag aagtgcctgg
1921 agaatgccca tctggcccag gcgctggagg ccgagcggca ggccctgcgg cagtgccagc
1981 gtgagaacca ggagctcaat gcccacaacc aggagctgaa caaccgcctg gctgcagaga
2041 tcacacggtt gcggacgctg ctgactgggg acggcggtgg ggaggccact gggtcacccc
2101 ttgcacaggg caaggatgcc tatgaactag aggtcttatt gcgggtaaag gaatcggaaa
2161 tacagtacct gaaacaggag attagctccc tcaaggatga gctgcagacg gcactgcggg
2221 acaagaagta cgcaagtgac aagtacaaag acatctacac agagctcagc atcgcgaagg
2281 ctaaggctga ctgtgacatc agcaggttga aggagcagct caaggctgca acggaagcac
2341 tgggggagaa gtcccctgac agtgccacgg tgtccggata tgatataatg aaatctaaaa
2401 gcaaccctga cttcttgaag aaagacagat cctgtgtcac ccggcaactc agaaacatca
2461 ggtccaagtc cgtaattgag caggtctcgt gggatacctg aaatgcaccc gcttcccggc
2521 ccatgcagga gagtctgaag gaaggcctga cggtgcaaga acggttgaag ctctttgaat
2581 ccagggactt gaagaaagac taggtgtgtc ccatccaagt tgagcacgcg ccttccccag
2641 cttgcagcag cacaccccaa gcgctgcttt tcacctgtac ctttgtttta ttattattat
2701 tattattgct gttgttgtca tcgttaactg tgggcatgga atgcgtgagg ctggcttctg
2761 ggttgtccac accactctct gctgtgttga cttcctgttg tcttcatcaa agcttttttc
2821 cgtggtattc taaaattagg ccagcagtgg gggctgggag ggcatctgtg ttagtccttt
2881 cctggctgtg acccgccaca ctcactgtca gtattaaggc ccagcagcct gttgataagc
2941 taccctgtct caccatgtgc tggtgtggaa acggggccca gccagcacgc ctcaaggtag
3001 atggaatccc cactggtcag agaaaaagct atgcggacac tccagcttgg cctgggtcac
3061 agcactgact cctcacccgc tagtctggct gttaagagga gaaagtgcac tgccttccag
3121 cccaggagga ggacagcatt ttgtatttgt tccactgatg cagcttagaa ccacacccct
3181 gagagtcgtg gcaaaccttt cacaacctgg aaaatgttga aagcaaccat tcctattttt
3241 gtttgttttt tattaaatct tgcacaaaaa aaaaaaaaaa aaaa
//