LOCUS BC075836 2275 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens retinoblastoma binding protein 4, mRNA (cDNA clone
MGC:88716 IMAGE:6338602), complete cds.
ACCESSION BC075836
VERSION BC075836.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2275)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2275)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: l Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5032026.
FEATURES Location/Qualifiers
source 1..2275
/db_xref="H-InvDB:HIT000265650"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88716 IMAGE:6338602"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2275
/gene="RBBP4"
/gene_synonym="NURF55"
/gene_synonym="RBAP48"
/db_xref="GeneID:5928"
/db_xref="HGNC:HGNC:9887"
/db_xref="MIM:602923"
CDS 28..1305
/gene="RBBP4"
/gene_synonym="NURF55"
/gene_synonym="RBAP48"
/codon_start=1
/product="retinoblastoma binding protein 4"
/protein_id="AAH75836.1"
/db_xref="GeneID:5928"
/db_xref="HGNC:HGNC:9887"
/db_xref="MIM:602923"
/translation="MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPS
LTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEK
GEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSK
PDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVD
AKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEV
NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA
SSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICS
VSEDNIMQVWQMAENIYNDEDPEGSVDPEGQGS"
BASE COUNT 652 a 445 c 481 g 697 t
ORIGIN
1 aggattcccc cggctcgcct gcccgccatg gccgacaagg aagcagcctt cgacgacgca
61 gtggaagaac gagtgatcaa cgaggaatac aaaatatgga aaaagaacac cccttttctt
121 tatgatttgg tgatgaccca tgctctggag tggcccagcc taactgccca gtggcttcca
181 gatgtaacca gaccagaagg gaaagatttc agcattcatc gacttgtcct ggggacacac
241 acatcggatg aacaaaacca tcttgttata gccagtgtgc agctccctaa tgatgatgct
301 cagtttgatg cgtcacacta cgacagtgag aaaggagaat ttggaggttt tggttcagtt
361 agtggaaaaa ttgaaataga aatcaagatc aaccatgaag gagaagtaaa cagggcccgt
421 tatatgcccc agaacccttg tatcatcgca acaaagactc cttccagtga tgttcttgtc
481 tttgactata caaaacatcc ttctaaacca gatccttctg gagagtgcaa cccagacttg
541 cgtctccgtg gacatcagaa ggaaggctat gggctttctt ggaacccaaa tctcagtggg
601 cacttactta gtgcttcaga tgaccatacc atctgcctgt gggacatcag tgccgttcca
661 aaggagggaa aagtggtaga tgcgaagacc atctttacag ggcatacggc agtagtagaa
721 gatgtttcct ggcatctact ccatgagtct ctgtttgggt cagttgctga tgatcagaaa
781 cttatgattt gggatactcg ttcaaacaat acttccaaac caagccactc agttgatgct
841 cacactgctg aagtgaactg cctttctttc aatccttata gtgagttcat tcttgccaca
901 ggatcagctg acaagactgt tgccttgtgg gatctgagaa atctgaaact taagttgcat
961 tcctttgagt cacataagga tgaaatattc caggttcagt ggtcacctca caatgagact
1021 attttagctt ccagtggtac tgatcgcaga ctgaatgtct gggatttaag taaaattgga
1081 gaggaacaat ccccagaaga tgcagaagac gggccaccag agttgttgtt tattcatggt
1141 ggtcatactg ccaagatatc tgatttctcc tggaatccca atgaaccttg ggtgatttgt
1201 tctgtatcag aagacaatat catgcaagtg tggcaaatgg cagagaacat ttataatgat
1261 gaagaccctg aaggaagcgt ggatccagaa ggacaagggt cctagatatg tctttacttg
1321 ttgtgatttt agactccctt tttttcttct caaccctgag agtgatttaa cactggtttt
1381 gagacagact ttattcagct atccctctat ataataggta ccaccgataa tgctattagc
1441 ccaaaccgtg ggtgttttct aaatattaat aggggggctt gattcaacaa agccacagac
1501 ttaacgttga aattttcttc aggaattttc tagtaaccca ggtctaaagt agctacagaa
1561 aggggaatat tatgtgtgat tatttttctt cttatgctat atccccaagt ttttcagact
1621 catttaagta aaggctagag tgagtaagga atagagccaa atgaggtagg tgtctgagcc
1681 atgaagtata aatactgaaa gatgtcactt ttattcagga aataggggga gattcaagtc
1741 atatagattc ctactcgaaa atcttgacac ctgactttcc aggatgcaca ttttcatacg
1801 tagaccagtt tcctcttggt ttcttcagtt aagtcaaaac aacacgttcc tctttcccca
1861 tatattcata tatttttgct cgttagtgta tttcttgagc tgttttcatg ttgtttattt
1921 cctgtctgtg aaatggtgtt tttttttttt gttgttggtt tttttttttt ttttttttta
1981 acttgggacc accaagttgt aaagatgtat gtttttacct gacagttata ccacaggtag
2041 actgtcaagt tgagaagagt gaatcaataa cttgtatttg ttttaaaaat taaattaatc
2101 cttgataaga gttgcttttt ttttttagga gttagtcctt gaccactagt ttgatgccat
2161 ctccattttg ggtgacctgt ttcaccagca ggcctgttac tctccatgac taactgtgta
2221 agtgcttaaa atggaataaa ttgcttttct acataaaaaa aaaaaaaaaa aaaaa
//