LOCUS BC075825 3813 bp mRNA linear HUM 28-SEP-2004 DEFINITION Homo sapiens ALS2 C-terminal like, mRNA (cDNA clone IMAGE:6573619), partial cds. ACCESSION BC075825 VERSION BC075825.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3813) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3813) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: o Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33359214. FEATURES Location/Qualifiers source 1..3813 /db_xref="H-InvDB:HIT000265639" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6573619" /tissue_type="Prostate, carcinoma" /clone_lib="NIH_MGC_40" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..3813 /gene="ALS2CL" /gene_synonym="DKFZp686I0110" /gene_synonym="FLJ36525" /db_xref="GeneID:259173" CDS <1..1988 /gene="ALS2CL" /gene_synonym="DKFZp686I0110" /gene_synonym="FLJ36525" /codon_start=3 /product="ALS2CL protein" /protein_id="AAH75825.1" /db_xref="GeneID:259173" /translation="EFSFCAKDSQGQAVWQWKVTWAVHQALHGKKDFPVLGAGLEPSQ PPDCRCAEYTFQAEGRLCQATYEGEWCRGRPHGKGTLKWPDGRNHVGNFCQGLEHGFG IRLLPQASEDKFDCYKCHWREGSMCGYGICEYSTDEVYKGYFQEGLRHGFGVLESGPQ APQPFRYTGHWERGQRSGYGIEEDGDRGERYIGMWQAGQRHGPGVMVTQAGVCYQGTF QADKTVGPGILLSEDDSLYEGTFTRDLTLMGKGKVTFPNGFTLEGSFGSGAGRGLHTQ GVLDTAALPPDPSSTCKRQLGVGAFPVESRWQGVYSPFRDFVCAGCPRDLQEALLGFD VQSSRELRRSQDYLSCERTHPEDSVGSMEDILEELLQHREPKALQLYLRKALSNSLHP LGKLLRTLMLTFQATYAGVGANKHLQELAQEEVKQHAQELWAAYRGLLRVALERKGQA LEEDEDTETRDLQVHGLVLPLMLPSFYSELFTLYLLLHEREDSFYSQGIANLSLFPDT QLLEFLDVQKHLWPLKDLTLTSNQRYSLVRDKCFLSATECLQKIMTTVDPREKLEVLE RTYGEIEGTVSRVLGREYKLPMDDLLPLLIYVVSRARIQHLGAEIHLIRDMMDPNHTG GLYDFLLTALESCYEHIQKEDMRLHRLPGHWHSRELW" BASE COUNT 809 a 1065 c 1194 g 745 t ORIGIN 1 aagagttctc cttttgtgcc aaggactccc agggccaggc agtctggcag tggaaggtga 61 cctgggctgt tcaccaggcc ctgcatggga agaaggactt ccccgtgctg ggggctggcc 121 tggagccctc ccagcctccc gactgccgct gcgcagaata taccttccag gcagagggcc 181 ggctctgcca ggccacctac gagggcgagt ggtgcagggg ccggccccac ggcaagggaa 241 ccctgaaatg gccggatggg cggaatcatg tggggaattt ctgccagggc ctggagcatg 301 gcttcggcat ccgcctgctg ccccaggcct ctgaggacaa gttcgactgt tacaagtgtc 361 actggcgaga aggcagcatg tgtggctacg gcatctgtga gtacagcacc gacgaggtgt 421 acaagggcta cttccaggag ggcctgcggc acggatttgg ggtccttgag agtggtccgc 481 aggcccccca gcccttcagg tacacgggcc actgggagag gggccagagg agcggctatg 541 gcattgagga ggatggtgac agaggtgagc gctacattgg catgtggcag gctggtcagc 601 gccacggccc aggggtcatg gtcacccagg caggtgtctg ctaccagggc accttccagg 661 cggacaagac ggtgggcccg ggcatcctcc tctctgaaga cgactccctg tatgagggca 721 ccttcaccag ggacctgacc ctcatgggga agggcaaggt caccttcccc aatggcttca 781 ccctggaggg ctcgttcggc agtggggcag ggagaggact gcacacacag ggtgtgctgg 841 acacggctgc cctcccacca gacccgagca gtacctgcaa gaggcagctg ggcgtgggtg 901 ccttccccgt ggaaagccgc tggcagggag tctacagccc cttccgggac tttgtgtgtg 961 ctggctgccc cagggacctg caggaggccc tgctgggctt cgacgtgcag agctccaggg 1021 agctgcgtag gtctcaggat tacctgtcct gcgagaggac ccaccctgag gacagtgtgg 1081 gcagtatgga agacatcctg gaggagctgc tgcagcaccg ggagcccaag gccctgcagc 1141 tgtacctcag gaaggctctg agcaactcac tgcaccccct gggaaagctg ctccggacac 1201 tgatgctgac cttccaggct acctacgcag gtgtcggggc caacaagcac ctgcaggagc 1261 tggcccagga ggaggtgaag cagcatgccc aggaactctg ggctgcctac aggggtctgc 1321 tgcgagttgc cttagagcgc aagggccagg ccctggagga ggatgaagac acagagacaa 1381 gggacctcca ggtgcatgga ttggtgctgc ccctcatgct gcccagcttc tactcagagc 1441 tcttcacgct ctacctgctg cttcatgagc gggaggacag cttctacagc cagggcattg 1501 ccaacttgag cctctttcct gatacccaac tgctcgagtt cctggatgtg cagaagcact 1561 tgtggcccct caaggacctc acgctgacga gcaatcagag gtactccctg gtcagggaca 1621 agtgtttcct gtcagccacc gagtgcctgc agaagatcat gaccacggtg gacccacggg 1681 agaagctgga ggtgctggag aggacatacg gggaaattga gggcacggtg tcgagggtat 1741 tgggccggga gtacaagctg cccatggacg acctgctgcc acttctcatc tacgtggtgt 1801 cgcgcgcccg aattcagcac ctgggagccg agatccacct gatccgtgac atgatggacc 1861 ccaaccacac aggaggcctg tatgacttcc tgctcacagc cctggagtcc tgttacgagc 1921 acatccagaa agaagacatg aggctgcacc gcttacctgg ccactggcac tccagggagc 1981 tctggtagcc tggcctttcc tggacagact gaagagctga gcagggcact gccagcctgt 2041 ccctcattac ccaaggcaag gggcaggaca ggccctcaga agcagctctt ggaggagatg 2101 agcattttgt tttgcacagg aaaatgctgc tgctgccctg actgggatga gggtgagggg 2161 tgacgggtgt ggccctggat gtggtggttt tcccttggcc actagcccat cttcaatgac 2221 cccttaatct gcagcagctc acaggctggg ggtgaggagt ccctggcttc tcttagcctg 2281 agcctttctc ccaagttcca gagcctctcc gggcctcagt gctgccatct gtacaatggt 2341 ggagtgagta cgctgtaaag gaccttccat tcattttgct gaattccaga gtccttttgg 2401 aaaactgact ttagtctgct gggctgtatt gacctctggc aggctcgaag cctcactggg 2461 tatgcagtca acaggatggg cctggagatc cgtgaactgc aggccacgta cccatgacgt 2521 aaacggcggc actggagcaa gctggggcgg ggggtgggta aaccctcact gccagcaggc 2581 cccaagtggc ttgtaaatca ttctcctgtg acgtctgtgg gcctgcgtgg ggacaacagg 2641 ggcacatgac atctgcctgg gccctgacca ataaaccctc agacccagga cccaggaccc 2701 tgctgtagtt ggggagcagg agtacctttg ggaggggagg actttattta aacagtggtt 2761 ctagtgtggg accaagagag gcaggagctg ggtcttgggg cagctttatt cctgttgggc 2821 ctcagtttct cttccccaca cagtttatct tccgtcacat tgtgccgggt gacgtgcacg 2881 gtctccctct gccctagcag gagatgcatg atgacaggca gtgtgatgtg ttctgaaagt 2941 gtccagggca aagcataggg agagggtgga tttgtgcagg gtgcagctct ggagaagaag 3001 ctggatcact cttggtccca ttccctaggc cctgagcaag tcaggctcct ggctctgggt 3061 gtggctcccc caaacgaagt actgacttca gcctgtgagg ggagggttga gggaggctct 3121 ggaaagccca gccacacctg agtccctggc agtagccttg gggcagaggg cacccgcaga 3181 gtcccagaga tgatgtgggc agtgggcaga gagagccttg gcgcctctgt ttgccaccac 3241 ttccccagga aggagggaca gcatttctct ggctggttcc actaaatgtg ccagcccaaa 3301 tgcagggcat gggctctggt tctgccagga gcctgtgaca cccccaggaa gggggtggaa 3361 ctgaggaaga gcgaggatat gcaggcactc atgcttaccg ggactggggc agctcactag 3421 gattctatcc tttccaatcg gcatcagcca gctcttgtcc cctgataagt gaggacagcc 3481 tgaccctggc ctcaaatgca gccatccctg agttcatgcg atgctgacgg gaccccagca 3541 cacttccctg cctcctttga gatctgcgag cccttgctgc agttcagatt caacaaggcc 3601 ctctgcccac cctctcacta ggcctcaccc aacaccagtg gaactggagc ctctggctgg 3661 gcacagtggc tcactttggg aggctgaggc aggaaggctg ctggaaactg agagttcaag 3721 accagcctgg gcaacatagt gagaccctgt ctctacaaat ataaaataaa ataattagct 3781 gggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //