LOCUS BC075803 2728 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens praja ring finger 1, mRNA (cDNA clone MGC:87793
IMAGE:3913310), complete cds.
ACCESSION BC075803
VERSION BC075803.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2728)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2728)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21539662.
FEATURES Location/Qualifiers
source 1..2728
/db_xref="H-InvDB:HIT000265618"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87793 IMAGE:3913310"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2728
/gene="PJA1"
/gene_synonym="RNF70"
/db_xref="GeneID:64219"
/db_xref="HGNC:HGNC:16648"
/db_xref="MIM:300420"
CDS 287..2218
/gene="PJA1"
/gene_synonym="RNF70"
/codon_start=1
/product="praja ring finger 1"
/protein_id="AAH75803.1"
/db_xref="GeneID:64219"
/db_xref="HGNC:HGNC:16648"
/db_xref="MIM:300420"
/translation="MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERI
ASQRKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPR
EYRASGSRRGMAYGHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARS
LAGPPPHFSSFSRDVREERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGD
SSERERREQNLPARPSRAPVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFD
TDDDDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVK
PEKVPRRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGES
WETLPGKEEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQ
EEQASLEEGEIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLE
VDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVAN
PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSI
WLQKSGTCPVCRCMFPPPL"
BASE COUNT 796 a 608 c 716 g 608 t
ORIGIN
1 ggcggtcgga gatccgagag ctctgcttct ctgaaaagcg tgtggctttc tggacttggt
61 ctacacctga cagtcactgg aatgctactc caggccttag aagaaagtga aactaatttt
121 aaaggcccct tattctttct gttacctgcc tgctgaagtg aaaataaatc tccctgctcc
181 tttattctaa actgatttta ctttcccatc tcaaaaacgt gtgcagggag caggagccct
241 cctacccgag ccccagctgt attggaaacc ctcctaagtc agagtgatgg gtcaggaatc
301 tagcaagcct gtatggccca atccaacagg agggtatcag tccaatacag gtaggaggta
361 tggaagaagg catgcttatg tcagtttcag gccacccacg agccagcggg aaaggattgc
421 cagccagaga aagacgaact ccgaagtccc aatgcacaga tcagccccca gtcaaaccac
481 caagaggagc cgatcgccat tttccactac tcgtcgtagt tgggacgaca gcgagagttc
541 gggaaccaac ctgaatattg ataatgagga ctattccagg tatccgccaa gagagtacag
601 agcttcgggt agcagaagag gaatggccta tggacatatt gactcttatg gggcagatga
661 tagtgaggag gagggggctg ggcctgttga gcgaccgcca gtgagaggga aaactggcaa
721 gtttaaagat gataagctgt atgacccaga gaaaggggca aggtctttgg ctgggccacc
781 tccacatttc tctagtttta gccgtgatgt gagagaggag cgagacaagt tagacccagt
841 ccctgcagca agatgctcag ctagcagagc tgacttcctg ccacaaagta gtgtggcctc
901 acagtcgtct tctgaaggca agctggctac aaaaggtgac agctcggaga gggagagaag
961 ggagcaaaat ttacctgcac gtcccagcag ggctcctgtg agtatttgtg gtggtgggga
1021 aaacacctca aagagtgcag aggaacctgt ggtcaggccc aaaatcagaa acctggcaag
1081 tccaaactgc gtgaaaccaa aaattttttt tgatactgat gatgatgacg atatgccaca
1141 cagtacttcc aggtggaggg ataccgccaa tgacaatgag ggccactcgg atggcctggc
1201 aagaagaggg agaggcgaga gttcaagtgg ctatcccgag ccaaagtacc ctgaagacaa
1261 acgggaagcg aggagtgacc aagtgaaacc agaaaaggtg ccgagacgac gacgcaccat
1321 ggccgaccct gacttctgga cgcacagtga tgattactac aaatactgcg acgaagactc
1381 tgacagtgac aaagagtgga ttgctgctct gcgtcggaaa tatcgaagcc gagagcaaac
1441 cctgtcctcc agtggcgaaa gctgggagac tctgccgggg aaagaagagc gggaacctcc
1501 acaggctaag gtgagtgcca gcactggcac cagccctggc cccggtgcta gtgccagtgc
1561 cggggctggc gccggggcca gtgctggcag caatggcagc aattaccttg aagaagttcg
1621 agaaccatct cttcaggaag agcaggcatc cctggaagaa ggagaaattc cttggctcca
1681 gtaccatgag aatgacagta gcagtgaggg ggataatgat tctggtcacg agttgatgca
1741 acctggggta ttcatgctgg atggaaacaa caaccttgaa gatgactcca gtgtgagcga
1801 agacctagaa gtggattgga gcctctttga tggatttgca gatgggttag gagtggctga
1861 agccatttcc tatgtggacc ctcagttcct cacctacatg gcacttgaag aacgcctggc
1921 ccaggcaatg gaaactgccc ttgcgcactt ggagtctctc gcagtggatg tagaggtggc
1981 caatccacca gcaagcaagg agagcattga cgctcttccc gagatcctgg tcactgaaga
2041 tcatggcgca gttggtcagg agatgtgctg ccccatctgc tgtagcgaat atgtgaaggg
2101 ggaggtggca actgagctgc cgtgccacca ctatttccac aagccgtgtg tgtccatctg
2161 gcttcagaag tcaggcacct gccccgtgtg ccgctgcatg ttccctcccc cactctaaag
2221 accaaggccg tttactcctg gtctgattat tttccccatc tgaaatccac aatactgcag
2281 gagccctctt gaaattaaca atggaaataa aaccaatcag tcagttagcc taaacctatt
2341 gattcctcgt gattatttcc aatgtgaaaa cagttgtgta tgattgcatt aaaaatcata
2401 tcatctttta gaggttagaa aagggaaaac taaactttct aaatgctact tgagattgca
2461 gtaagaagat acgttttcta acctgaaagt taaatcgcat ttgttttctt cagtagaatg
2521 ggaatgtgtt gctgttactt gtaatgtcaa gtttatctgt taaatatgtc caaaaggcaa
2581 aatcattttt gttgcatgtt atgggtcgat gttcctgtaa ttgcagtgcc gtaaaagctt
2641 attaaagttg ttcttttggt tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//