LOCUS BC075795 5353 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens catenin (cadherin-associated protein), delta 1, mRNA
(cDNA clone MGC:87286 IMAGE:5269008), complete cds.
ACCESSION BC075795
VERSION BC075795.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5353)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5353)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUL-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: n Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10835009.
FEATURES Location/Qualifiers
source 1..5353
/db_xref="H-InvDB:HIT000265610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87286 IMAGE:5269008"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5353
/gene="CTNND1"
/gene_synonym="CAS"
/gene_synonym="KIAA0384"
/gene_synonym="P120CAS"
/gene_synonym="P120CTN"
/db_xref="GeneID:1500"
/db_xref="MIM:601045"
CDS 388..3189
/gene="CTNND1"
/gene_synonym="CAS"
/gene_synonym="KIAA0384"
/gene_synonym="P120CAS"
/gene_synonym="P120CTN"
/codon_start=1
/product="CTNND1 protein"
/protein_id="AAH75795.1"
/db_xref="GeneID:1500"
/db_xref="MIM:601045"
/translation="MDDSEVESTASILASVKEQEAQFEKLTRALEEERRHVSAQLERV
RVSPQDANPLMANGTLTRRHQNGRFVGDADLERQKFSDLKLNGPQDHSHLLYSTIPRM
QEPGQIVETYTEEDPEGAMSVVSVETSDDGTTRRTETTVKKVVKTVTTRTVQPVAMGP
DGLPVDASSVSNNYIQTLGRDFRKNGNGGPGPYVGQAGTATLPRNFHYPPDGYSRHYE
DGYPGGSDNYGSLSRVTRIEERYRPSMEGYRAPSRQDVYGPQPQVRVGGSSVDLHRFH
PEPYGLEDDQRSMGYDDLDYGMMSDYGTARRTGTPSDPRRRLRSYEDMIGEEVPSDQY
YWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLGAVKSNAAAYLQH
LCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNC
DGVPALVRLLRKARDMDLTEVITGTLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGW
EREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEI
GQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPHAASCFGAKKG
KGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAI
QNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKEL
IGKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEK
LVLINKSGNRSEKEVRAAALVLQTIWGYKELRKPLEKEGWKKSDFQVNLNNASRSQSS
HSYDDSTLPLIDRNQKSDKKPDREEIQMSNMGSNTKSLDNNYSTPNERGDHNRTLDRS
GDLGDMEPLKGTTPLMQKI"
BASE COUNT 1365 a 1289 c 1275 g 1424 t
ORIGIN
1 gggggggaaa aaaaagagag agggagagag agagaaagaa gagcaggaaa gatcccgaaa
61 ggaggaagag gtggcgaaaa atcaactgcc ctgctggatt tgtctttctc agcaccttgg
121 cgaagccttg ggtttctttc ttaaaggact gatttttaga actccacatt tgagctctct
181 ccttcctgct tcctccttgc tgtggtggct gggatgcttc ttccatgatt ttttgaatct
241 agactgggct gttctctgtg ttaaaccaat cagttgcgac cttctcttaa cagtgtgaag
301 tgagggggtc tctctccctc cttctccttc ctctgtgatt caccttcctt tttaccctgc
361 cctgcggcgg ctccgcccct taccttcatg gacgactcag aggtggagtc gaccgccagc
421 atcttggcct ctgtgaagga acaagaggcc cagtttgaga agctgacccg ggcgctggag
481 gaggaacggc gccacgtctc ggcgcagctg gaacgcgtcc gggtctcacc acaagatgcc
541 aacccactca tggccaacgg cacactcacc cgccggcatc agaacggccg gtttgtgggc
601 gatgctgacc ttgaaagaca gaaattttca gatttgaaac tcaacggacc ccaggatcac
661 agtcaccttc tatatagcac catccccagg atgcaggagc cggggcagat tgtggagacc
721 tacacggagg aggatcctga gggagccatg tctgtagtct ctgtggagac ctcagatgat
781 gggaccactc ggcgcacaga gaccacggtc aagaaagtag tgaagactgt gacaacacgg
841 acagtacagc cagtcgctat gggaccagac gggttgcctg tggatgcttc atcagtttct
901 aacaactata tccagacttt gggtcgtgat ttccgcaaga atggcaatgg gggacctggt
961 ccctatgtgg ggcaagctgg cactgctacc cttcctagga acttccacta ccctcctgat
1021 ggttatagtc gccactatga agatggttat ccaggtggca gtgataacta tggcagtctg
1081 tcccgggtga cccgcattga ggagcggtat aggcccagca tggaaggcta ccgggcacct
1141 agtagacagg atgtgtatgg gccccaaccc caggttcggg taggtgggag cagcgtggat
1201 ctgcatcgct ttcatccaga gccttatggg ctagaggatg accagcgtag tatgggctat
1261 gatgacctgg attatggtat gatgtctgat tatggcactg cccgtcggac tgggacaccc
1321 tctgaccctc gtcggcgcct caggagctat gaagacatga ttggtgagga ggtgccatcg
1381 gatcaatact actgggctcc tttggcccag catgagcgag gaagtttagc aagcttggat
1441 agcctgcgca aaggagggcc tccacctcct aattggagac agccagagct gccagaggtg
1501 atcgccatgc ttggattccg cttgggtgct gtcaagtcca atgcagctgc atacctgcaa
1561 cacttatgct accgcaatga caaggtgaag actgacgtgc ggaagctcaa gggcatccca
1621 gtactggtgg gattgttaga ccatcccaaa aaggaagtgc accttggagc ctgtggagct
1681 ctcaagaata tctcttttgg acgtgaccag gataacaaga ttgccataaa aaactgtgat
1741 ggtgtgcctg cccttgtgcg attgcttcga aaggctcgtg atatggacct tactgaagtt
1801 attaccggaa ccctgtggaa tctttcatcc catgactcaa tcaaaatgga gattgtggac
1861 catgcactgc atgccttgac agatgaagtg atcattcctc attctggttg ggagcgggaa
1921 cctaatgaag actgtaagcc acgccatatt gagtgggaat cggtgctcac caacacagct
1981 ggctgcctta ggaatgtaag ctcagagagg agtgaagctc gccggaaact tcgggaatgt
2041 gatggtttag ttgatgccct cattttcatt gttcaggctg agattgggca gaaggattca
2101 gacagcaagc ttgtagagaa ctgtgtttgc cttcttcgga acttatcata tcaagttcac
2161 cgggagatcc cacaggcaga gcgttaccaa gaggcagctc ccaatgttgc caacaatact
2221 gggccacatg ctgccagttg ctttggggcc aagaagggca aagggaaaaa acctatagag
2281 gatccagcaa acgatacagt ggatttccct aaaagaacga gtccagctcg aggctatgag
2341 ctcttatttc agccagaggt ggttcggata tacatctcac ttcttaagga gagcaagact
2401 cctgccatcc tagaagcctc agctggagct atccagaact tgtgtgctgg gcgctggacg
2461 tatggtcgat acatccgctc tgctctgcgt caagagaagg ctctttctgc catagctgac
2521 ctcctgacta atgaacatga acgggtggtg aaagctgcat ctggagcact gagaaacctg
2581 gctgtggatg ctcgcaacaa agaattaatt ggtaaacatg ctattcctaa cttggtaaag
2641 aatctgccag gaggacagca gaactcctct tggaatttct ctgaggacac tgtcatctct
2701 attttgaaca ctatcaacga ggttatcgct gagaacttgg aggctgccaa aaagcttcga
2761 gagacacagg gtattgagaa gctggtgttg atcaacaaat cagggaaccg ctcagaaaaa
2821 gaagttcgag cagcagcact tgtattacag acaatctggg gatataagga actgcggaag
2881 ccactggaaa aagaaggatg gaagaaatca gactttcagg tgaatctaaa caatgcttcc
2941 cgaagccaga gcagtcattc atatgatgat agtactctcc ctctcattga ccggaaccaa
3001 aaatcagata agaaacctga tcgggaagaa attcagatga gcaatatggg atcaaacaca
3061 aaatcactag ataacaacta ttccacacca aatgagagag gagaccacaa tagaacactg
3121 gatcgatcgg gggatctagg cgacatggag ccattgaagg gaacaacacc cttgatgcag
3181 aagatttagc accactatct ccgttccatc tgggcttata tgtactttta ttttttggtg
3241 gtgaaattga ctgatgattt tcctttttct tcgctggact attgtgccaa ctgccaggct
3301 gcctcctgcc cttacagccc taagtggctg ccttctttcc atcaactccc aacttcttcc
3361 tgtgaagttt aattgtctca acgcctcccc ctcccccatt ccctccattt ttctcccaag
3421 aaacctgact caattatttg catattttga gaaactgctg cagattagtt ctttttgcca
3481 gttttccctg gaactcctgg ccttttgtgg aggggaggga tggagagaat aggaatcttc
3541 actagaagcc gtgggaagaa ttggaagtta catgctgtat atgcaatgtc cagcagtctg
3601 ataaactgac gattcttaat caagattttt ttcctgatgg ggaagggact tttattttct
3661 tttagagagg ggaaagtgtg agctcttccc ttattcctaa tggctatttt tgaagcaaag
3721 aaggccagca acattggcac atgccacctg gcaaaggacc cttgagtaag tgaaggtctc
3781 ctaaaactgg gattaagaaa ccttgctctc ctcatctcca aggcagggac catcaagaac
3841 ctacagactc catctcttct gcaagcctca tgccaaccct gggctattgc tgctgcccct
3901 taaacacagg ctgtccttaa cccacctctc ctgccctgtg atatgtctgc tgagttggcc
3961 tggccatttc caagaggctg tagaaagggg agaatgtcaa ggaagacttt tggtagagaa
4021 ggagcagaaa gatgtgtttt tgggaagaag aagacctcta ggaggagcta gtaggaatgt
4081 acatgaagca attagtctga aactggcttc cccactcccc cgtttctcct tttcctatcc
4141 ttataggcct gtcccttgcc tctgccctgg attggttggc aaactaaagg acttgatgta
4201 cataactcct gtcccttttc ccttacaagg tggggattgc ccctggcttt gcctcttctt
4261 tgtgcctttg gcctggggtg catctcctcc cgcccttcca tgtgcctttc tttgcctctg
4321 cagtctcatt tctcataatt ttgcaaatta tattttgttg ctttcttacc tactattggc
4381 cctaaatagc agaaagaaga gaagtgaccg agagaacctc agattcttca ttgaggattg
4441 gtatagccat gatttcagtc atagcaagct tttgctcaac agcatatggg tgggattttg
4501 caaaaatcct attctgatga atctcaaagt aaggctggta agagaagtga gtggtgtgac
4561 tcttactcct taggtgccca gaatttacca tcatctctga aggagttaca gggaagtggt
4621 ctccccaatt ctcccctccc tccagtattg ccccctctca ctttagcata tattaattag
4681 caggttgggc tagagaaatc agctgctatg cgggttgatt attattatta tttctaatcc
4741 ttttccttat ttgccttcta ctccccttaa tctaatctaa aagctctgtt ccatgcaact
4801 ggagttcctt atccctctct tccccttccc ttatatattg aggctatggg gtaggagaaa
4861 agtgcacaac ccaccacccc ctttactcgt gcattaaaat ttcttattta cccttttccc
4921 ccttcccatt tcttcccact ttcatctacc ttttctggca aaaaggagcc ttttgctctc
4981 tgtgacccta agagcacact gcacagggaa aattgcccca tccagacctg gctccactct
5041 tgatctctct tgtcctcttc tgctcttttc ctggtgctct tttttctcgg tggggtgtgg
5101 gtaatagaac agccgtgggc ttttggggac ctttaacttt tttttctctc ttttgttata
5161 aaaaacacta aacattcaat tccagagaac caaaaatccc accttcccac cgaacactac
5221 taaggggctt gtgttctgct ccataccttt tctcttttct ttctgtcttg ttaatgcttt
5281 taaaaacaaa tgagtttttt atataaataa agtttttaaa gtgtgtaaaa aaaaaagaaa
5341 aaaaaaaaaa aaa
//