LOCUS BC073992 814 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens peptidylprolyl isomerase A (cyclophilin A), mRNA (cDNA
clone MGC:87929 IMAGE:6161389), complete cds.
ACCESSION BC073992
VERSION BC073992.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 814)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 814)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: j Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56847631.
FEATURES Location/Qualifiers
source 1..814
/db_xref="H-InvDB:HIT000265212"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87929 IMAGE:6161389"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..814
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
CDS 35..532
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/codon_start=1
/product="peptidylprolyl isomerase A (cyclophilin A)"
/protein_id="AAH73992.1"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
/translation="MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEK
GFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMAN
AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE"
BASE COUNT 261 a 173 c 180 g 200 t
ORIGIN
1 cgccaccgcc gaggaaaacc gtgtactatt agccatggtc aaccccaccg tgttcttcga
61 cattgccgtc gacggcgagc ccttgggccg cgtctccttt gagctgtttg cagacaaggt
121 cccaaagaca gcagaaaatt ttcgtgctct gagcactgga gagaaaggat ttggttataa
181 gggttcctgc tttcacagaa ttattccagg gtttatgtgt cagggtggtg acttcacacg
241 ccataatggc actggtggca agtccatcta tggggagaaa tttgaagatg agaacttcat
301 cctaaagcat acgggtcctg gcatcttgtc catggcaaat gctggaccca acacaaatgg
361 ttcccagttt ttcatctgca ctgccaagac tgagtggttg gatggcaagc atgtggtgtt
421 tggcaaagtg aaagaaggca tgaatattgt ggaggccatg gagcgctttg ggtccaggaa
481 tggcaagacc agcaagaaga tcaccattgc tgactgtgga caactcgaat aagtttgact
541 tgtgttttat cttaaccacc agatcattcc ttctgtagct caggagagca cccctccacc
601 ccatttgctc gcagtatcct agaatctttg tgctctcgct gcagttccct ttgggttcca
661 tgttttcctt gttccctccc atgcctagct ggattgcaga gttaagttta tgattatgaa
721 ataaaaacta aataacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
781 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//