LOCUS       BC073987                2249 bp    mRNA    linear   HUM 09-DEC-2005
DEFINITION  Homo sapiens choroideremia (Rab escort protein 1), mRNA (cDNA clone
            IMAGE:5735390), complete cds.
ACCESSION   BC073987
VERSION     BC073987.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2249)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (23-JUN-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP/Gazdar
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 174 Row: b Column: 16
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..2249
                     /db_xref="H-InvDB:HIT000265207"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:5735390"
                     /tissue_type="Lung, large cell carcinoma"
                     /clone_lib="NIH_MGC_68"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2249
                     /gene="CHM"
                     /gene_synonym="FLJ38564"
                     /gene_synonym="GGTA"
                     /gene_synonym="HSD-32"
                     /gene_synonym="REP-1"
                     /db_xref="GeneID:1121"
                     /db_xref="HGNC:HGNC:1940"
                     /db_xref="IMGT/GENE-DB:1940"
                     /db_xref="MIM:300390"
     CDS             460..909
                     /gene="CHM"
                     /gene_synonym="FLJ38564"
                     /gene_synonym="GGTA"
                     /gene_synonym="HSD-32"
                     /gene_synonym="REP-1"
                     /codon_start=1
                     /product="CHM protein"
                     /protein_id="AAH73987.1"
                     /db_xref="GeneID:1121"
                     /db_xref="HGNC:HGNC:1940"
                     /db_xref="IMGT/GENE-DB:1940"
                     /db_xref="MIM:300390"
                     /translation="MNYLFFFLTTSGLYCLSGSHGSNVKYIVLTYFNCSWSLTSPGFR
                     DVLKGSQLWQVTDSWEMERTKEYSSCLTFLPTADIVQARVMEELNLLASQAAPIPTSQ
                     CTAPPHLFSPLSLTSPFIMSHKSGTVGSHYNLLCHRDSIFLISNHVS"
BASE COUNT          722 a          407 c          394 g          726 t
ORIGIN      
        1 cagttggtaa gccctaatat acactacata aaaacgttag ggctgcctgt aatcccagca
       61 ctttgggaag ctgaggtggg tagatcactt gaggtcagga gttcgagacc agcctggcca
      121 acatggcgaa accctgtctc tactaaaaat acaaaatttt agctgggtgt tatggtgggc
      181 acctgtaatc ccagctactt tgaagatgag gtagcagact cacttgaacc agggaggcgg
      241 aggttgcagt gagccaagat tttgccactg cactccagcc tgggtgacag agcaagactc
      301 tgtctcacaa aaaaaaaaaa aagggggctg tacataggca gcaaactaag ctgcagtgat
      361 gttgcctata tttaaatttt ctcaaatggc caagctctga tggtctactt tatttgagca
      421 atagttgaga cttataattg cctataaata aacaaacaaa tgaactattt gttttttttt
      481 ctcacaacat ctggcctata ttgtctgtca ggaagccatg gctccaatgt aaagtacata
      541 gttcttacat acttcaactg cagctggtcc ctgacctcac caggtttcag agatgttctt
      601 aaaggaagcc agctgtggca ggtcacagat tcatgggaaa tggaaagaac caaggaatat
      661 agctcttgcc tcacctttct acccactgca gatatagttc aagccagagt aatggaagaa
      721 cttaacttac tagcctctca ggctgctcct atccctacct cccagtgtac agcccctccc
      781 catctcttta gtcccctttc cctcacttcc ccttttataa tgtcacacaa atcagggaca
      841 gtaggatcac attataacct actttgtcat agggattcga tttttcttat atcaaatcat
      901 gtttcctgaa acccagctgg ggcatatgca ctcaatgtct aatacatact tattaatgta
      961 ccggatattg gccttgcccc tggatatcag caatatatta taaaaggttc cagtagatga
     1021 gacgattgag tctgaataca attgcagtaa attgtgccaa taaagatatt gtactgttac
     1081 ggtcttagag ttaaagccgc ttgaatgcag catgcacatt catgtaaaca gacaatcagg
     1141 gtaggcctag aataaccaca aaaattctat tggccttact gcagccacct atatgtagaa
     1201 caatggagga gatagtttgt ggtccattat tgtaccctgt ttcatccatt agcatcagaa
     1261 tctctctttc aggtcattta ttaaatatga ttgaaatgtt taaaagttcc tgaacatgat
     1321 tcatgatgat taaaatatca tacaactgat aaaagacttt aagaacttta tatatttcct
     1381 gttgcctcaa aatgtaacag aaattattct tagagctttg attttagcta tcctaattac
     1441 tgcaaataaa tatttgttct tatagtttta aatcaaaaag aaaagtcttg ttataaaacc
     1501 ttaagcttga aatcatatta ataaaatgta ttgtacatag tggaaaattt tcagtagcta
     1561 atttaaaatt tcagaaaatg ctattaaaga attttgattc aagtatttaa actgtttagt
     1621 tatgcatgct tcttattaac cgaaaatgat aataccattt agtttagtga tcagtatgag
     1681 aagcaatacc taatcctatg ttgctattgt attttttcct agttggtgtg cctgctcaga
     1741 aaaacatata ctgtatgtgt atacatacct gtgtatatat aaaaggtcaa tttatatatt
     1801 tttctatagg aaaatggagt aacaagttcc ctatctccca tatttatttg tccatagtaa
     1861 aatggccaca ttgatgataa tttctagaac tagtttctga gattgtcagc cctttgtcta
     1921 aaataatggc agtattaatg attgacttct gtcactgcca tagttacctg gattgtcagc
     1981 cttggtagcc tttgtctaaa gtcctaaaga gttccaaaaa aaatgtgttg aaatttaatt
     2041 gctaaatagt ggttggtgat tctttacagt aggaattgta ataattttct tgcaaataag
     2101 ttatttactg ctattgatat tgaataattt gtcttttatt cagatatatt tcaaaaagca
     2161 tgaatatatg attattcata aattgtatac tttaccagta agttttcaga ggaaataaag
     2221 acttttaaat ccttttaaaa aaaaaaaaa
//