LOCUS BC073987 2249 bp mRNA linear HUM 09-DEC-2005 DEFINITION Homo sapiens choroideremia (Rab escort protein 1), mRNA (cDNA clone IMAGE:5735390), complete cds. ACCESSION BC073987 VERSION BC073987.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2249) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2249) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: b Column: 16 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2249 /db_xref="H-InvDB:HIT000265207" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5735390" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2249 /gene="CHM" /gene_synonym="FLJ38564" /gene_synonym="GGTA" /gene_synonym="HSD-32" /gene_synonym="REP-1" /db_xref="GeneID:1121" /db_xref="HGNC:HGNC:1940" /db_xref="IMGT/GENE-DB:1940" /db_xref="MIM:300390" CDS 460..909 /gene="CHM" /gene_synonym="FLJ38564" /gene_synonym="GGTA" /gene_synonym="HSD-32" /gene_synonym="REP-1" /codon_start=1 /product="CHM protein" /protein_id="AAH73987.1" /db_xref="GeneID:1121" /db_xref="HGNC:HGNC:1940" /db_xref="IMGT/GENE-DB:1940" /db_xref="MIM:300390" /translation="MNYLFFFLTTSGLYCLSGSHGSNVKYIVLTYFNCSWSLTSPGFR DVLKGSQLWQVTDSWEMERTKEYSSCLTFLPTADIVQARVMEELNLLASQAAPIPTSQ CTAPPHLFSPLSLTSPFIMSHKSGTVGSHYNLLCHRDSIFLISNHVS" BASE COUNT 722 a 407 c 394 g 726 t ORIGIN 1 cagttggtaa gccctaatat acactacata aaaacgttag ggctgcctgt aatcccagca 61 ctttgggaag ctgaggtggg tagatcactt gaggtcagga gttcgagacc agcctggcca 121 acatggcgaa accctgtctc tactaaaaat acaaaatttt agctgggtgt tatggtgggc 181 acctgtaatc ccagctactt tgaagatgag gtagcagact cacttgaacc agggaggcgg 241 aggttgcagt gagccaagat tttgccactg cactccagcc tgggtgacag agcaagactc 301 tgtctcacaa aaaaaaaaaa aagggggctg tacataggca gcaaactaag ctgcagtgat 361 gttgcctata tttaaatttt ctcaaatggc caagctctga tggtctactt tatttgagca 421 atagttgaga cttataattg cctataaata aacaaacaaa tgaactattt gttttttttt 481 ctcacaacat ctggcctata ttgtctgtca ggaagccatg gctccaatgt aaagtacata 541 gttcttacat acttcaactg cagctggtcc ctgacctcac caggtttcag agatgttctt 601 aaaggaagcc agctgtggca ggtcacagat tcatgggaaa tggaaagaac caaggaatat 661 agctcttgcc tcacctttct acccactgca gatatagttc aagccagagt aatggaagaa 721 cttaacttac tagcctctca ggctgctcct atccctacct cccagtgtac agcccctccc 781 catctcttta gtcccctttc cctcacttcc ccttttataa tgtcacacaa atcagggaca 841 gtaggatcac attataacct actttgtcat agggattcga tttttcttat atcaaatcat 901 gtttcctgaa acccagctgg ggcatatgca ctcaatgtct aatacatact tattaatgta 961 ccggatattg gccttgcccc tggatatcag caatatatta taaaaggttc cagtagatga 1021 gacgattgag tctgaataca attgcagtaa attgtgccaa taaagatatt gtactgttac 1081 ggtcttagag ttaaagccgc ttgaatgcag catgcacatt catgtaaaca gacaatcagg 1141 gtaggcctag aataaccaca aaaattctat tggccttact gcagccacct atatgtagaa 1201 caatggagga gatagtttgt ggtccattat tgtaccctgt ttcatccatt agcatcagaa 1261 tctctctttc aggtcattta ttaaatatga ttgaaatgtt taaaagttcc tgaacatgat 1321 tcatgatgat taaaatatca tacaactgat aaaagacttt aagaacttta tatatttcct 1381 gttgcctcaa aatgtaacag aaattattct tagagctttg attttagcta tcctaattac 1441 tgcaaataaa tatttgttct tatagtttta aatcaaaaag aaaagtcttg ttataaaacc 1501 ttaagcttga aatcatatta ataaaatgta ttgtacatag tggaaaattt tcagtagcta 1561 atttaaaatt tcagaaaatg ctattaaaga attttgattc aagtatttaa actgtttagt 1621 tatgcatgct tcttattaac cgaaaatgat aataccattt agtttagtga tcagtatgag 1681 aagcaatacc taatcctatg ttgctattgt attttttcct agttggtgtg cctgctcaga 1741 aaaacatata ctgtatgtgt atacatacct gtgtatatat aaaaggtcaa tttatatatt 1801 tttctatagg aaaatggagt aacaagttcc ctatctccca tatttatttg tccatagtaa 1861 aatggccaca ttgatgataa tttctagaac tagtttctga gattgtcagc cctttgtcta 1921 aaataatggc agtattaatg attgacttct gtcactgcca tagttacctg gattgtcagc 1981 cttggtagcc tttgtctaaa gtcctaaaga gttccaaaaa aaatgtgttg aaatttaatt 2041 gctaaatagt ggttggtgat tctttacagt aggaattgta ataattttct tgcaaataag 2101 ttatttactg ctattgatat tgaataattt gtcttttatt cagatatatt tcaaaaagca 2161 tgaatatatg attattcata aattgtatac tttaccagta agttttcaga ggaaataaag 2221 acttttaaat ccttttaaaa aaaaaaaaa //