LOCUS BC073983 2415 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens early growth response 1, mRNA (cDNA clone MGC:88036
IMAGE:6188360), complete cds.
ACCESSION BC073983
VERSION BC073983.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2415)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2415)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: n Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31317226.
FEATURES Location/Qualifiers
source 1..2415
/db_xref="H-InvDB:HIT000265203"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88036 IMAGE:6188360"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2415
/gene="EGR1"
/gene_synonym="AT225"
/gene_synonym="G0S30"
/gene_synonym="KROX-24"
/gene_synonym="NGFI-A"
/gene_synonym="TIS8"
/gene_synonym="ZIF-268"
/gene_synonym="ZNF225"
/db_xref="GeneID:1958"
/db_xref="HGNC:HGNC:3238"
/db_xref="MIM:128990"
CDS 263..1894
/gene="EGR1"
/gene_synonym="AT225"
/gene_synonym="G0S30"
/gene_synonym="KROX-24"
/gene_synonym="NGFI-A"
/gene_synonym="TIS8"
/gene_synonym="ZIF-268"
/gene_synonym="ZNF225"
/codon_start=1
/product="early growth response 1"
/protein_id="AAH73983.1"
/db_xref="GeneID:1958"
/db_xref="HGNC:HGNC:3238"
/db_xref="MIM:128990"
/translation="MAAAKAEMQLMSPLQISDPFGSFPHSPTMDNYPKLEEMMLLSNG
APQFLGAAGAPEGSGSNSSSSSSGGGGGGGGGSNSSSSSSTFNPQADTGEQPYEHLTA
ESFPDISLNNEKVLVETSYPSQTTRLPPITYTGRFSLEPAPNSGNTLWPEPLFSLVSG
LVSMTNPPASSSSAPSPAASSASASQSPPLSCAVPSNDSSPIYSAAPTFPTPNTDIFP
EPQSQAFPGSAGTALQYPPPAYPAAKGGFQVPMIPDYLFPQQQGDLGLGTPDQKPFQG
LESRTQQPSLTPLSTIKAFATQSGSQDLKALNTSYQSQLIKPSRMRKYPNRPSKTPPH
ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG
EKPFACDICGRKFARSDERKRHTKIHLRQKDKKADKSVVASSATSSLSSYPSPVATSY
PSPVTTSYPSPATTSYPSPVPTSFSSPGSSTYPSPVHSGFPSPSVATTYSSVPPAFPA
QVSSFPSSAVTNSFSASTGLSDMTATFSPRTIEIC"
BASE COUNT 497 a 893 c 568 g 457 t
ORIGIN
1 cttggggagc cgccgccgcc atccgccgcc gcagccagct tccgccgccg caggaccggc
61 ccctgcccca gcctccgcag ccgcggcgcg tccacgcccg cccgcgccca gggcgagtcg
121 gggtcgccgc ctgcacgctt ctcagtgttc cccgcgcccc gcatgtaacc cggccaggcc
181 cccgcaactg tgtcccctgc agctccagcc ccgggctgca cccccccgcc ccgacaccag
241 ctctccagcc tgctcgtcca ggatggccgc ggccaaggcc gagatgcagc tgatgtcccc
301 gctgcagatc tctgacccgt tcggatcctt tcctcactcg cccaccatgg acaactaccc
361 taagctggag gagatgatgc tgctgagcaa cggggctccc cagttcctcg gcgccgccgg
421 ggccccagag ggcagcggca gcaacagcag cagcagcagc agcgggggcg gtggaggcgg
481 cgggggcggc agcaacagca gcagcagcag cagcaccttc aaccctcagg cggacacggg
541 cgagcagccc tacgagcacc tgaccgcaga gtcttttcct gacatctctc tgaacaacga
601 gaaggtgctg gtggagacca gttaccccag ccaaaccact cgactgcccc ccatcaccta
661 tactggccgc ttttccctgg agcctgcacc caacagtggc aacaccttgt ggcccgagcc
721 cctcttcagc ttggtcagtg gcctagtgag catgaccaac ccaccggcct cctcgtcctc
781 agcaccatct ccagcggcct cctccgcctc cgcctcccag agcccacccc tgagctgcgc
841 agtgccatcc aacgacagca gtcccattta ctcagcggca cccaccttcc ccacgccgaa
901 cactgacatt ttccctgagc cacaaagcca ggccttcccg ggctcggcag ggacagcgct
961 ccagtacccg cctcctgcct accctgccgc caagggtggc ttccaggttc ccatgatccc
1021 cgactacctg tttccacagc agcaggggga tctgggcctg ggcaccccag accagaagcc
1081 cttccagggc ctggagagcc gcacccagca gccttcgcta acccctctgt ctactattaa
1141 ggcctttgcc actcagtcgg gctcccagga cctgaaggcc ctcaatacca gctaccagtc
1201 ccagctcatc aaacccagcc gcatgcgcaa gtaccccaac cggcccagca agacgccccc
1261 ccacgaacgc ccttacgctt gcccagtgga gtcctgtgat cgccgcttct cccgctccga
1321 cgagctcacc cgccacatcc gcatccacac aggccagaag cccttccagt gccgcatctg
1381 catgcgcaac ttcagccgca gcgaccacct caccacccac atccgcaccc acacaggcga
1441 aaagcccttc gcctgcgaca tctgtggaag aaagtttgcc aggagcgatg aacgcaagag
1501 gcataccaag atccacttgc ggcagaagga caagaaagca gacaaaagtg ttgtggcctc
1561 ttcggccacc tcctctctct cttcctaccc gtccccggtt gctacctctt acccgtcccc
1621 ggttactacc tcttatccat ccccggccac cacctcatac ccatcccctg tgcccacctc
1681 cttctcctct cccggctcct cgacctaccc atcccctgtg cacagtggct tcccctcccc
1741 gtcggtggcc accacgtact cctctgttcc ccctgctttc ccggcccagg tcagcagctt
1801 cccttcctca gctgtcacca actccttcag cgcctccaca gggctttcgg acatgacagc
1861 aaccttttct cccaggacaa ttgaaatttg ctaaagggaa aggggaaaga aagggaaaag
1921 ggagaaaaag aaacacaaga gacttaaagg acaggaggag gagatggcca taggagagga
1981 gggttcctct taggtcagat ggaggttctc agagccaagt cctccctctc tactggagtg
2041 gaaggtctat tggccaacaa tcctttctgc ccacttcccc ttccccaatt actattccct
2101 ttgacttcag ctgcctgaaa cagccatgtc caagttcttc acctctatcc aaagaacttg
2161 atttgcatgg attttggata aatcatttca gtatcatctc catcatatgc ctgacccctt
2221 gctcccttca atgctagaaa atcgagttgg caaaatgggg tttgggcccc tcagagccct
2281 gccctgcacc cttgtacagt gtctgtgcca tggatttcgt ttttcttggg gtactcttga
2341 tgtgaagata atttgcatat tctattgtat tatttggagt taggtcctca cttgggggaa
2401 aaaaaaaaaa aaaaa
//