LOCUS BC073974 1739 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chondroadherin, mRNA (cDNA clone MGC:88039
IMAGE:5730623), complete cds.
ACCESSION BC073974
VERSION BC073974.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1739)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1739)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: b Column: 21.
FEATURES Location/Qualifiers
source 1..1739
/db_xref="H-InvDB:HIT000265195"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88039 IMAGE:5730623"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_124"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1739
/gene="CHAD"
/gene_synonym="SLRR4A"
/db_xref="GeneID:1101"
/db_xref="HGNC:HGNC:1909"
/db_xref="MIM:602178"
CDS 54..1133
/gene="CHAD"
/gene_synonym="SLRR4A"
/codon_start=1
/product="chondroadherin"
/protein_id="AAH73974.1"
/db_xref="GeneID:1101"
/db_xref="HGNC:HGNC:1909"
/db_xref="MIM:602178"
/translation="MVRPMLLLSLGLLAGLLPALAACPQNCHCHSDLQHVICDKVGLQ
KIPKVSEKTKLLNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLI
YLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIR
ELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALSKL
RVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFLGVTTLKHVHLE
NNRLNQLPSNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRPDATCASPAKFKG
QHIRDTDAFRSCKFPTKRSKKAGRH"
BASE COUNT 390 a 621 c 400 g 328 t
ORIGIN
1 cccgcgcccc gccgccgctg ctgcccccag ccccggcccc aggcgtccca gccatggtcc
61 gcccaatgct cttgctcagc ctcggcctcc tggctggtct gctgccggcg ctggccgcct
121 gcccccagaa ctgccactgc cacagcgacc tgcagcacgt catctgcgac aaggtggggc
181 tgcagaagat ccccaaggtg tcagagaaga ccaagctgct caacctacag cgcaacaact
241 tcccggtgct ggctgccaat tcgttccggg ccatgccgaa cctcgtgtca ttgcacctgc
301 agcactgcca gatccgcgag gtggccgccg gtgccttccg cggcctcaag caacttatct
361 acttgtacct gtcccataac gacatccgcg tgctgcgcgc aggtgccttc gacgacctga
421 ccgagctgac ctacctctac ctggaccaca acaaggtcac tgagctgccc cgggggttgc
481 tctccccgct ggtcaacctc ttcatcttgc agctcaacaa caacaagatc cgtgagctgc
541 gcgcaggcgc cttccaggga gccaaggacc tgcgctggct ctacctgtcg gaaaacgcgt
601 tgagctccct gcagcccggg gccctggacg atgtggagaa cctcgccaaa ttccacgtgg
661 acaggaacca gctgtccagc tacccctcag ctgccctgag caagctacgg gtggtggagg
721 agctgaagct gtcccacaac cccctgaaaa gcatcccgga caatgccttc cagtcctttg
781 gcagatacct ggagaccctc tggctggaca acaccaacct ggagaagttc tcagatggtg
841 ccttcctggg tgtaaccacg ctgaaacacg tccatttgga gaacaaccgc ttgaaccagc
901 taccctccaa cttccccttc gacagcctgg agaccctcgc ccttaccaat aacccctgga
961 agtgtacctg ccagctccgg ggccttcggc ggtggctgga agccaaggcc tcccgcccag
1021 atgccacctg tgcctcacct gccaagttca agggccagca catccgtgac acggacgcct
1081 tccgcagctg caagttcccc accaagaggt ccaagaaagc tggccgccat taaacaggtt
1141 ctgacccagc cagtcctggt gactggcctc tgccttccac cggagagact actgaccttc
1201 tcacctccac ccataccttc tccccacagc ctctgctgat gcacagagct gcctacacct
1261 agacacgtcc tggcaggggg cctcgggcac tccactacca acccagctcc acccagcagt
1321 gtcctgggga gaaggaaggc tgagcctctc cccagccttc atgccttccc caccctccag
1381 ctcctcttgg agaagctgtt gctgagaccc ccccccccca agtcaatcag aaccacaaca
1441 ggttggtcat caggatggcc accctcccag gatcatcctt cctctgttcc tctttccctg
1501 ccacgtggaa acaatcatca gatccttgcc ccaccccttg cttccagaaa gggttttaaa
1561 gcccatgccc caactctgcc agcccccacc tgccaggacg ttctagcagg acatcggtgc
1621 tttgctgtcc atcttcccat gctgcaattt cttcctgaga tttctataaa tataaatgta
1681 tgtatgtatt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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