LOCUS BC073963 2349 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens suppressor of Ty 6 homolog (S. cerevisiae), mRNA (cDNA
clone IMAGE:5587330), complete cds.
ACCESSION BC073963
VERSION BC073963.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2349)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2349)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: a Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9506696
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2349
/db_xref="H-InvDB:HIT000265185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5587330"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2349
/gene="SUPT6H"
/gene_synonym="emb-5"
/gene_synonym="KIAA0162"
/gene_synonym="SPT6"
/gene_synonym="SPT6H"
/db_xref="GeneID:6830"
/db_xref="MIM:601333"
CDS 19..1656
/gene="SUPT6H"
/gene_synonym="emb-5"
/gene_synonym="KIAA0162"
/gene_synonym="SPT6"
/gene_synonym="SPT6H"
/codon_start=1
/product="SUPT6H protein"
/protein_id="AAH73963.1"
/db_xref="GeneID:6830"
/db_xref="MIM:601333"
/translation="MPSRGTRPEDSSVLIPTDNSTPHKEDLSSKVWNHFDSGSCPGQA
IGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRT
SDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQRTTYIKRVIAHPSFHNINFK
QAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHVDVREEGKENAFSLGATLW
INSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDRKKLEELLIKTKKEKPTF
IPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQIFPTVNGLFRWFKDHY
QDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQMFSAIAAVTGQ
GQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSYSYTTPSQPIT
TPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAER
RKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR"
BASE COUNT 654 a 661 c 613 g 421 t
ORIGIN
1 gtcttgcgct cggtggaaat gcccagccga gggacgcgac cagaggacag ctctgtgctg
61 atccccaccg acaattcgac cccacacaag gaggatctaa gcagcaaggt gtggaaccac
121 tttgacagcg gttcgtgccc aggccaggcc atcggtgtca aaacacggct agacaatggt
181 gtcaccggct tcatccccac caaattcctc agtgacaaag tggtaaagcg gccagaagaa
241 cgagtgaagg tgggaatgac tgttcactgc cgcatcatga agattgacat tgagaagttc
301 agtgcagacc tgacctgccg cacctcagac ctcatggaca ggaacaatga gtggaagctg
361 cccaaagaca cctactatga ctttgatgct gaagctgcag accacaagca ggaggaggac
421 atgaagcgga agcagcagcg gaccacatac atcaagagag tgatcgcaca cccatccttc
481 cataatatca atttcaagca agcagaaaag atgatggaga ccatggacca gggtgatgtg
541 attatccgac caagcagcaa gggcgagaac cacctgacag tgacctggaa agtcagtgat
601 ggcatctacc agcatgtgga tgtgcgggag gagggcaagg aaaatgcctt cagcctggga
661 gccactctgt ggatcaacag tgaggaattc gaagatttgg atgagattgt tgctcgctat
721 gtccagccca tggcatcctt tgcccgggac cttctgaatc acaagtatta tcaggactgc
781 agcggtgggg accgcaagaa attagaggag ctgctcatca aaactaagaa ggagaagccc
841 accttcatcc cttatttcat ctgtgcctgc aaggaactgc ccggcaagtt cctactggga
901 taccagcccc ggggtaaacc caggatagaa tatgtaacgg tgactccaga gggattccgg
961 taccggggcc agatcttccc aaccgtgaat ggactgttta gatggtttaa ggatcactac
1021 caggatcctg taccaggcat cacccctagc agcagcagca ggacccggac acctgcctct
1081 atcaatgcta ccccagccaa catcaacctt gcagatctga cacgggctgt gaatgccctg
1141 cctcagaaca tgacttcaca gatgttcagt gccattgctg cggtgacagg ccaaggacag
1201 aaccctaatg ccaccccagc ccagtgggcc tccagccagt acggctatgg cggcagtgga
1261 ggcggcagca gtgcttacca cgtattccca acgccagccc agcagccagt ggccacacca
1321 ctaatgaccc ctagctactc ctacacgacc ccaagccagc ccatcaccac ccctcagtac
1381 caccagctcc aggccagcac caccccacag tcggcccagg cccagcccca gccctcttcc
1441 agctcccggc aacggcagca gcagccaaag tccaacagcc atgcagccat cgactgggga
1501 aaaatggcgg agcagtggct gcaggaaaag gaggcagaac ggcggaaaca gaagcagcgg
1561 ctgacacctc ggccctcccc cagccccatg atcgaaagca cccccatgtc cattgctggc
1621 gatgccaccc cactcctgga cgagatggat cggtaggggg cctgctcctc ggactctggt
1681 tacctctgag gctgggaaag gcctggctgc ccactgcctc cctccctgcc cctcctttta
1741 tgtccataaa gtggcgtgaa gtgagacgtt ctctttggtg gtcaacccgg atgggtgaca
1801 ggctggatgg ccttgtgaac ttgagctcag tgtatgctag gcaacaattc tcccgctcca
1861 gaccctcacc gaccacctgt cctgggacca ggctgggagg ggagtgtggc agggaggagg
1921 aagaggaagg tgagaatgag tagaacagtt ttgtattcta ctccctacaa gccattttga
1981 acttctgccc tcaccggact ctgggctgtg actggggcac caaactcagc acatgagtct
2041 cccctagctc tcgtggggag agggatgcta tttattcagt ttggggcagg agggagagga
2101 gggaaagtat ttctgaccct gatgccaaca gccgggtggc tgtccaagca ggattgcagg
2161 ggacacaggg aagcactgcc cagcccctgc ctggctgccc tttcccccct gctgctgcca
2221 ccgcttcctg cctgtcattt gaataaacag tgtttctatt gaaaaaaaaa aaaaaaaaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaa
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