LOCUS BC073956 1167 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens estrogen-related receptor alpha, mRNA (cDNA clone
IMAGE:6011619), partial cds.
ACCESSION BC073956
VERSION BC073956.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1167)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1167)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18860919.
FEATURES Location/Qualifiers
source 1..1167
/db_xref="H-InvDB:HIT000265179"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6011619"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1167
/gene="ESRRA"
/gene_synonym="ERR1"
/gene_synonym="ERRa"
/gene_synonym="ERRalpha"
/gene_synonym="NR3B1"
/db_xref="GeneID:2101"
/db_xref="HGNC:HGNC:3471"
/db_xref="MIM:601998"
CDS <1..359
/gene="ESRRA"
/gene_synonym="ERR1"
/gene_synonym="ERRa"
/gene_synonym="ERRalpha"
/gene_synonym="NR3B1"
/codon_start=3
/product="ESRRA protein"
/protein_id="AAH73956.1"
/db_xref="GeneID:2101"
/db_xref="HGNC:HGNC:3471"
/db_xref="MIM:601998"
/translation="QPAAPPSEGTRRGGAARPEEAAEEGPPAAPGSLRHSGPLGPHAC
PTALPEPQVTSAMSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVAHFYGVKLEGK
VPMHKLFLEMLEAMMD"
BASE COUNT 256 a 334 c 372 g 205 t
ORIGIN
1 agcagccggc ggcgccgccg agtgagggga cgcggcgcgg tggggcggcg cggcccgagg
61 aggcggcgga ggaggggccg cccgcggccc ccggctcact ccggcactcc gggccgctcg
121 gcccccatgc ctgcccgacc gcgctgccgg agccccaggt gaccagcgcc atgtccagcc
181 aggtggtggg cattgagcct ctctacatca aggcagagcc ggccagccct gacagtccaa
241 agggttcctc ggagacagag accgagcctc ctgtggccca tttctatggg gtgaagctgg
301 agggcaaggt gcccatgcac aagctgttct tggagatgct cgaggccatg atggactgag
361 gcaaggggtg ggactggtgg gggttctggc aggacctgcc tagcatgggg tcagccccaa
421 gggctggggc ggagctgggg tctgggcagt gccacagcct gctggcaggg ccagggcaat
481 gccatcagcc cctgggaaca ggccccacgc cctctcctcc ccctcctagg gggtgtcaga
541 agctgggaac gtgtgtccag gctctgggca cagtgctgcc ccttgcaagc cataacgtgc
601 ccccagagtg tagggggcct tgcggaagcc atagggggct gcacgggatg cgtgggaggc
661 agaaacctat ctcagggagg gaaggggatg gaggccagag tctcccagtg ggtgatgctt
721 ttgctgctgc ttaatcctac cccctcttca aagcagagtg ggacttggag agcaaaggcc
781 catgccccct tcgctcctcc tctcatcatt tgcattgggc attagtgtcc ccccttgaag
841 caataactcc aagcagactc cagcccctgg acccctgggg tggccagggc ttccccatca
901 gctcccaacg agcctcctca gggggtagga gagcactgcc tctatgccct gcagagcaat
961 aacactatat ttatttttgg gtttggccag ggaggcgcag ggacatgggg caagccaggg
1021 cccagagccc ttggctgtac agagactcta ttttaatgta tatttgctgc aaagagaaac
1081 cgcttttggt tttaaacctt taatgagaaa aaaatatata ataccgagct caaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//