LOCUS BC073909 3760 bp mRNA linear HUM 27-JUL-2004
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member
10, mRNA (cDNA clone IMAGE:4522136), partial cds.
ACCESSION BC073909
VERSION BC073909.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3760)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3760)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3760
/db_xref="H-InvDB:HIT000265133"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4522136"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3760
/gene="SLC39A10"
/gene_synonym="DKFZp564L2123"
/gene_synonym="FLJ90515"
/gene_synonym="KIAA1265"
/gene_synonym="LZT-Hs2"
/db_xref="GeneID:57181"
/db_xref="MIM:608733"
CDS <1..1086
/gene="SLC39A10"
/gene_synonym="DKFZp564L2123"
/gene_synonym="FLJ90515"
/gene_synonym="KIAA1265"
/gene_synonym="LZT-Hs2"
/codon_start=1
/product="SLC39A10 protein"
/protein_id="AAH73909.1"
/db_xref="GeneID:57181"
/db_xref="MIM:608733"
/translation="HQHAHGHGHSHGHESNKFLEEYDAVLKGLVALGGIYLLFIIEHC
IRMFKHYKQQRGKQKWFMKQNTEESTIGRKLSDHKLNNTPDSDWLQLKPLAGTDDSVV
SEDRLNETELTDLEGQQESPPKNYLCIEEEKIIDHSHSDGLHTIHEHDLHAAAHNHHG
ENKTVLRKHNHQWHHKHSHHSHGPCHSGSDLKETGIANIAWMVIMGDGIHNFSDGLAI
GAAFSAGLTGGISTSIAVFCHELPHELGDFAVLLKAGMTVKQAIVYNLLSAMMAYIGM
LIGTAVGQYANNITLWIFAVTAGMFLYVALVDMLPEMLHGDGDNEEHGFCPVGQFILQ
NLGLLFGFAIMLVIALYEDKIVFDIQF"
BASE COUNT 1131 a 651 c 704 g 1274 t
ORIGIN
1 caccaacatg cacatgggca tggacattct catggacatg aatctaacaa gtttttggaa
61 gaatatgatg ctgtattgaa aggacttgtt gctctaggag gcatttactt gctatttatc
121 attgaacact gcattagaat gtttaagcac tacaaacaac aaagaggaaa acagaaatgg
181 tttatgaaac agaacacaga agaatcaact attggaagaa agctttcaga tcacaagtta
241 aacaatacac cagattctga ctggcttcaa ctcaagcctc ttgccggaac tgatgactcg
301 gttgtttctg aagatcgact taatgaaact gaactgacag atttagaagg ccaacaagaa
361 tcccctccta aaaattacct ttgtatagaa gaggagaaaa tcatagacca ttctcacagt
421 gatggattac ataccattca tgagcatgat ctccatgctg ctgcacataa ccaccacggc
481 gagaacaaaa ctgtgctgag gaagcataat caccagtggc accacaagca ttctcatcat
541 tcccatggcc cctgtcattc tggatccgat ctgaaagaaa caggaatagc taatatagcc
601 tggatggtga tcatggggga tggcatccac aacttcagtg atgggctcgc aattggtgca
661 gctttcagtg ctggattgac aggaggaatc agtacttcta tagccgtctt ctgtcatgaa
721 ctgccacatg aattaggaga ttttgcagtt cttcttaaag caggcatgac tgtaaagcaa
781 gcaattgtat acaacctcct ctctgccatg atggcttaca taggcatgct cataggcaca
841 gctgttggtc agtatgccaa taacatcaca ctttggatct ttgcagtcac tgcaggcatg
901 ttcctctatg tagccttggt ggatatgctt ccagaaatgt tgcatggtga tggtgacaat
961 gaagaacatg gcttttgtcc tgtggggcaa ttcatccttc agaatttagg attgctcttt
1021 ggatttgcca ttatgctggt gattgccctc tatgaagata aaattgtgtt tgacatccag
1081 ttttgacctt tcccagtaat cactgttgat tacgagaatg ttaccatgca gctttgcatc
1141 tgttccttgt actgtatgca cattgctcaa aggaaagtca gtggcttgca ctacttacaa
1201 gtttcataga tttgagccta accacaagag gctggtgctt agtactgttt tccctgcacg
1261 taggggtctt ttaaaaatat aaagcttgtg ataaagagag gagaatatgg gactccatga
1321 accagtgttg atatgtttga ttaagacttt tcacaaaata atcatataaa acactagtct
1381 ctttattagt agaaacttct gtggctatgc agaaatagag atcgaaccaa aaaaaatcat
1441 ttaaacttta aaaatatttt aaatggactt tggggagaca ttttttgtgt gttttaagaa
1501 tgaattgtag tgctctttaa ttcagctaca tatattcatg tggtgatagg gatcaacttg
1561 acacaacttt gaaactgcat aaagtagaca taggaactag aggaaagctc aggctgcatt
1621 agagtatgaa tttagcattg ggaaaagccc ttattcttga atctagagtt actatttttg
1681 tatatatttg catagtgttt aaacctgcag cctaaactac tgaaatttgt gattgtatgt
1741 ttgtgtgagc ttcagtttaa tgaaagattc ataatggttc tttgtattat tataatactt
1801 ggtgttgggg tgttctttct gttttgtttt ttactttaat tttgttttga tttttttttt
1861 tttttggcgg gggtaggtga gggtttggag catgtggtct ttttaaaaaa ttgtaaccct
1921 ctagaaaata tcaaagaaat gaaccagacg tggtttaaat agttgatttt cctattttaa
1981 cagtaccaac tagttaattg ggaaatgtaa gttctgaatg ttcacattgc tttaccagtt
2041 tggcactgga accaagagca catgtcgtgg ctggctacaa ggttgtaaag cagaaaatcg
2101 aagtttacca tgtctgtaat gtgtacatga agtgtcaatt tagaacagtt actaggataa
2161 actccattat tgccatggct gtcatggtac ccaagtgact tggaagatgc atttaaatta
2221 ctcagctgaa atcacttgat catcttgtgc caagatatgc tgttggtgcc tgatagggat
2281 tagtctttta ggtgccctgt tctcctacca taattgtgaa tgatttgtga gaagtgcaag
2341 ccatgtttat cctgaatttt tacttaataa tttgtattac tagtcatatg catgtagctt
2401 tctgtttaca tcctatgcca catggtcttc atttatgcca ggtaaactgt atttgaacta
2461 tgtgcagcta gctttgtttt aatctgcttg gcaaccagtg tagctgctgt aacaatctat
2521 cttattgttc aaatatataa gagccaaact cttttccatt ccatctaaaa tgttttcatt
2581 tagtactctt ctttcctcct actctatgaa cttcaaaaca aaaacaaaac tttgagagca
2641 gcacatgcat ccaggtattt atagattatt gccagtgtct tttctgtatg ctataagcaa
2701 gggagcttag gtgttatttc tttaatttat gcttgaatct gaaaaattat ttctgactta
2761 ctccatggcc tccttataat aagtagaagt tttatatata attaattttc agcattgggc
2821 actgaattag gacagtcctc atctcattgc ttggcccttc aagcaaccta gctaaaaggt
2881 gctgatattt tatttagtac tgccaacttc aagtgattta gatatctatc tatctatcta
2941 gatttctgaa ccaagatata tttatagttc acttttgggt ttttataccc acggtaggat
3001 tctgcattcc agcattaaat ctgcttcatt ttagaacctt tataaaagca atagctggaa
3061 tatactccca gttttaaaat aaataaatgc ctgattgatt taaagcaagt aggttatgct
3121 gaagtatata aagaagtttt atattctctc aaaaatggta ttatctttct ttatttgcta
3181 gattcttaca aatcttttaa gagggctgta acagttgctg ctagtattag ggttccacat
3241 cattctaatg tatagtttca agtcttaata gacaatctga attccactac atttcttttg
3301 gctccaacat tccttttagc ttgaccagtc taatttaaaa tgtgtttgtt ggaggtcatt
3361 aacgttactt gtacaatgct gtcactgtgt gacatccata tgaattttgg tatatatcaa
3421 tcaatcaatc aatcaatcac attgcattca atcaatcagc tgtgattgat tatgcttaga
3481 aatactatag taactagatg cagtgtgaat tttttccatt aacaaacaaa caagtcagtg
3541 gcttaaatgt gattatggtc ctgcaaggtg attcttgcta aaatatctaa acttttgttt
3601 tgttttaact gaatcatttt ttaacttaaa aagctggaaa atatcaaatg ctgttttttt
3661 tttcattgtc aacagtggtg tgtcatttta tgtatgttcc taatgcttat ggaactcctc
3721 caaaataaag ttactcaaag agagcaaaaa aaaaaaaaaa
//