LOCUS BC073880 1853 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens chromosome 5 open reading frame 25, mRNA (cDNA clone
IMAGE:5171434), complete cds.
ACCESSION BC073880
VERSION BC073880.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1853)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1853)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: h Column: 17
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1853
/db_xref="H-InvDB:HIT000265104"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5171434"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1853
/gene="C5orf25"
/gene_synonym="FLJ44216"
/gene_synonym="MGC33586"
/gene_synonym="MGC40402"
/db_xref="GeneID:375484"
/db_xref="HGNC:HGNC:24779"
CDS 281..1282
/gene="C5orf25"
/gene_synonym="FLJ44216"
/gene_synonym="MGC33586"
/gene_synonym="MGC40402"
/codon_start=1
/product="C5orf25 protein"
/protein_id="AAH73880.1"
/db_xref="GeneID:375484"
/db_xref="HGNC:HGNC:24779"
/translation="MPRSFEQVIILKKWFLKPYKGQTLPGRVLFLRYVVQTLEDDFQQ
TLRRQRQHLQQSIANMVLSCDKQPHNVRDVIKWLVKAVTEDGLTQPPNGNQTSSGTGI
LKASSSHPSSQPNLTKNTNQLIVCQLQRMLSIAVEVDRTPTCSSNKIAEMMFGFVLDI
PERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQALYFLNNSTSLLKCQ
SDKSQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKPQQGDDITV
VDVEKQIEAFRSRLIQMLGEPLVPQLQDKVHLLKLLLFYAADLNPDAEPFQKGWSGS"
BASE COUNT 565 a 406 c 384 g 498 t
ORIGIN
1 caacagactt ggctcaatca gctcgcatga ctggaagttc atcagtagag tggacatcat
61 ggcggtttga tctagcagca caggagtcat taaagaacca gtttctcttt ctctgttttg
121 ccatctgtag ttttgggtat atcctgaggt tgataggttc agtgagaggg agagattgac
181 ttcccatggc tgcctcttaa atcaaatgat ctacaatcct agagattcca gtagatatct
241 gattgcagct taggtgttag aaaattataa ttatctgcag atgcctagat cctttgaaca
301 agtaataata cttaaaaaat ggtttctgaa accttataag ggacaaactc tgcctgggcg
361 agtccttttc ctgcgttatg tcgttcagac cctagaagat gactttcagc agaccctgag
421 gaggcaacgg cagcacctgc agcaatccat tgcaaacatg gtgctttcct gtgacaagca
481 gccccacaat gtcagggatg ttatcaagtg gctggtcaaa gcagtaactg aagatggatt
541 gactcagccc ccaaatggaa atcaaacgtc ttcaggaaca ggaatcttga aagccagcag
601 tagccaccct tcttcccagc ccaacctgac aaagaacacc aatcagctga ttgtgtgcca
661 gcttcagagg atgctctcca tagccgtaga ggtggacagg acccccacct gcagctccaa
721 taaaattgcc gagatgatgt ttgggtttgt gctggacatt cctgagagga gccagagaga
781 aatgttcttt actaccatgg aaagccacct tctgcgctgc aaagtgttag aaatcatatt
841 cctccacagc tgtgagacac ccacccgcct gcctctgtct ctggcccagg ccctctactt
901 tctgaataat tctacgtcac tgctcaagtg tcagtcagat aaaagccagt ggcagacttg
961 ggacgaattg gttgagcatc tgcagtttct gctgtccagt tatcaacatg ttttaagaga
1021 acacttaagg agttccgtga tcgaccgaaa ggacttaata atcaaaagga ttaagcccaa
1081 accccagcaa ggagatgaca tcacagtggt agacgtagag aagcagattg aggccttccg
1141 cagccgcctg atccagatgc tgggggagcc tcttgtcccc caactccaag acaaagtgca
1201 cttgttgaag ctcctgctct tctatgctgc ggacttgaac cctgatgcag agccctttca
1261 aaagggctgg agcggctcct gagggcctgc caagcactga atgccaagaa tacctcctga
1321 actctctctc caactgctca gaagctctaa aagcatgaaa agtggttaaa atcttacagg
1381 accaaacctg cattatttaa tcagtaggtt gtaatttcta actctagtaa atatcttttt
1441 ttaaataatc ctatcctagc ctgttctcaa atatggctta aatatacaag gtatatatat
1501 tttttaataa attatttatc tatacttttt tgaaacaggt taatactctg tgcatcacat
1561 gtttaacatt ttcattcaag atgtggaaaa aatccctctg ctgaacctag tctatacacc
1621 aatattatgt cattcaaggt accgacaacc tgtttcagga gagagacgtt catttttccc
1681 taatgaaatg caagcattct gttagaccta ttatattgcc tgttaatttg actgtaatga
1741 atagggggta gaaacaaaag gatcaagtgt gttataaaac atttgatgtt aaaaggagac
1801 aataaaaagg caatggtttt tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//