LOCUS BC073876 2484 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens syntaxin 16, mRNA (cDNA clone MGC:90328
IMAGE:4371823), complete cds.
ACCESSION BC073876
VERSION BC073876.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2484)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2484)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47778941.
FEATURES Location/Qualifiers
source 1..2484
/db_xref="H-InvDB:HIT000265100"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90328 IMAGE:4371823"
/tissue_type="Bone, osteosarcoma"
/clone_lib="NIH_MGC_86"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2484
/gene="STX16"
/gene_synonym="hsyn16"
/gene_synonym="SYN16"
/db_xref="GeneID:8675"
/db_xref="MIM:603666"
CDS 66..1031
/gene="STX16"
/gene_synonym="hsyn16"
/gene_synonym="SYN16"
/codon_start=1
/product="STX16 protein"
/protein_id="AAH73876.1"
/db_xref="GeneID:8675"
/db_xref="MIM:603666"
/translation="MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAA
LADDRMALVSGISLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKH
LNRPTLDDSSEEEHAIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVAS
LAQALQELSTSFRHAQSGYLKRMKNREERSQHFFDTSVPLMDDGDDNTLYHRGFTEDQ
LVLVEQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCI
KTEDGLKQLHKAEQYQKKNRKMLVILILFVIIIVLIVVLVGVKSR"
BASE COUNT 724 a 500 c 566 g 694 t
ORIGIN
1 agtgaataaa tcaggaatat aagtgggcgg ggggcccctg agaggggggt cgcaaagggt
61 gagacatggc caccaggcgt ttaaccgacg ctttcttgtt gttgcggaat aattccatcc
121 aaaaccggca gctgttagcc gagcaagtga gtagtcacat cacctccagc cctctgcatt
181 cacgtagcat tgctgcgctt gctgatgacc gtatggcact ggtgtcaggc atcagcttag
241 atccagaagc agcgattggt gtgacaaaac ggccacctcc taagtgggtg gatggagtgg
301 atgaaattca gtatgatgtt ggccggatta agcagaagat gaaagaattg gccagccttc
361 atgacaagca tttaaacaga cccaccctgg atgacagcag cgaagaggaa catgccattg
421 agataactac ccaagagatc actcagctct tccacaggtg ccagcgtgcc gtgcaggccc
481 tgccgagccg ggcccgggcc tgctccgagc aggaggggcg gctgcttggg aacgtggtgg
541 cctcgctggc gcaggccctg caggaactct ccaccagctt ccggcacgca cagtcaggct
601 acctcaaacg catgaagaat cgagaggaaa gatcccagca ttttttcgac acatcagtac
661 cactaatgga tgatggagac gataacactc tttaccatcg gggttttaca gaggaccagt
721 tagttctggt ggagcagaac acactgatgg tggaagagcg ggaacgagag attcgccaga
781 ttgtacagtc catttctgac ctgaatgaaa tattcaggga cttaggggcg atgattgtag
841 aacagggtac agtccttgac agaattgact ataacgttga acagtcctgt atcaaaactg
901 aagatggttt gaaacagctt cacaaggcag aacagtatca aaagaagaat cggaagatgc
961 ttgtgatttt aatattattt gtcatcatca ttgtgctcat tgttgtcctc gttggcgtga
1021 agtctcgata agtggcattg ggttttcgtg tgtgccgcgc gtgtggatct cccgggtgtg
1081 aggggcttgg cctgcgcccc gccagctgcc cgcagaggtg cagcctcgag gaatctgagg
1141 gcgtcggggc agcgaacctt tgcatccacg gactcctcct tccctagtcc tgctcaagcg
1201 gtccggggaa tgggtttttg tttttccttc attgttgaga atttaaggac ctttgatact
1261 gctgcacaat agagattgag ttctgggatc agttataata tatatttttt ttagaaagag
1321 aaaatgagct gagagtttac aggcactgca gaagctgttc agtattatat gtgtatatgc
1381 tattttttta gcagccatgt ctgagcagaa tgttaacata atttttggaa aaattttctt
1441 taaaccatct ggtttttaag aaatttggta ccaaaaattg atgagtagag gcaaaaatgc
1501 cccttcatct ttctctatat attttccagt tgaaaacaaa ctaagaagtc ctttaagaat
1561 ttataatccg ttccccatta acttaattta gcttttccat cactgttaat gatcagagta
1621 acaaagtgtg aaaaataaga aaccatcatt gatgttaatt aacacattta gatgggccag
1681 ttaaaacagc ttcataagtt ttaaattaat tgtaaatgga atattcctca tttaaaattt
1741 ttgcactgca ttttctactg taaaccaaaa gaggttacta agcaaaacca cctaaattta
1801 agttggtgat ttaaatgaat ctcacattaa aagaaagctt gacagtgtta tgaaagccac
1861 cagactcagc cagtgtgtcc ccatgggtat ccccagccat ccttgctcaa tccattactt
1921 atatactaac tacataatga cctgttcaaa ccagactcta tttaatgaac tgtgaattta
1981 cacagaggcc attttaaatg ggtcacccca tttaggatta gtggatctca aattattaac
2041 caaacatcac tccatttcaa agtaaaatat tccaccagcg atttgattta ttggctcttc
2101 cattgccact gagcaatgcc caggaagcag gcacattgcc aaggactggg ggcatcttga
2161 ctaggaagct cctcgtttgt gtgagcgtgg gtcagaccgc caaagtagga cttcatcgtt
2221 tacctaccta ttatcaatat ggtgcttgaa tatattccta taactgtaga acagtgtgga
2281 aagtgatggt aactttgaag ttgttcatgt tttattggct ttgttttaat tgacactagt
2341 agagttttaa tggtctttgt gtaaatttta atggcttttc cattgttttt gcttctctta
2401 aaaagtttaa gaagaatatg acctcattaa atgtgctgtt ttatttggaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaa
//