LOCUS BC073857 2265 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens polymerase (RNA) I polypeptide B, 128kDa, mRNA (cDNA
clone IMAGE:3867133), partial cds.
ACCESSION BC073857
VERSION BC073857.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2265)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2265)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: a Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149911.
FEATURES Location/Qualifiers
source 1..2265
/db_xref="H-InvDB:HIT000265081"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3867133"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2265
/gene="POLR1B"
/gene_synonym="FLJ10816"
/gene_synonym="FLJ21921"
/gene_synonym="RPA135"
/gene_synonym="Rpo1-2"
/db_xref="GeneID:84172"
CDS <1..1684
/gene="POLR1B"
/gene_synonym="FLJ10816"
/gene_synonym="FLJ21921"
/gene_synonym="RPA135"
/gene_synonym="Rpo1-2"
/codon_start=2
/product="POLR1B protein"
/protein_id="AAH73857.1"
/db_xref="GeneID:84172"
/translation="DSLRHFKVLREKRIPPWMEVVLIPMTGKPSLYPGLFLFTTPCRL
VRPVQNLALGKEELIGTMEQIFMNVAIFEDEVFAGVTTHQELFPHSLLSVIANFIPFS
DHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPSMYDYYDMDNY
PIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFIDLSEKIKQGDSSLV
FGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMYYKSKENCVVDN
IKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGM
VPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALEYFGEMLK
AAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDRVTNQP
IGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEK
PPPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV"
BASE COUNT 643 a 471 c 502 g 649 t
ORIGIN
1 agattctctt cgtcatttta aggtgttgag agagaaaaga attcctccct ggatggaagt
61 ggtccttata cccatgacag gaaaaccaag tctgtaccca ggattgttcc tttttaccac
121 tccttgtaga ctggtacggc ctgtgcagaa cttagcattg ggcaaagaag agctaattgg
181 aactatggaa cagatcttca tgaatgtcgc tatctttgag gatgaagttt ttgctggagt
241 taccacacac caggaactct ttccacacag cctgctgagt gtgattgcca acttcatccc
301 tttctctgat cacaaccaga gtccacggaa catgtaccaa tgccagatgg gtaagcaaac
361 tatgggcttt ccacttctca cttatcaaga ccgatcggat aacaaactgt atcgtcttca
421 gactcctcag agtcccttgg tgagaccctc catgtatgat tattatgaca tggataacta
481 tccaattggg accaatgcca tcgttgctgt gatttcttac actggctatg atatggaaga
541 tgccatgatt gtgaataagg cctcttggga acgaggcttt gcccatggaa gtgtctacaa
601 gtctgagttc atagacctct ctgaaaaaat taaacaagga gatagtagcc tggtgtttgg
661 catcaaacct ggtgacccac gcgttctgca gaagttagat gacgatggat tgccgtttat
721 aggagcaaaa ctgcagtacg gagatccgta ttacagctac ctcaacctca acaccgggga
781 aagttttgtg atgtactata agagtaaaga aaattgtgtt gtggataaca tcaaagtgtg
841 cagtaatgac actgggagtg gaaaattcaa gtgtgtttgc atcactatga gagtgcctcg
901 gaacccaact atcggagata aatttgccag tcgccatggg cagaagggca ttttaagcag
961 attgtggccg gctgaggaca tgccttttac tgagagtggg atggtcccag acattctgtt
1021 caatccccat ggttttccat cccgcatgac cattgggatg ttaattgaga gtatggccgg
1081 gaagtctgca gctttgcatg gtctctgcca tgatgctaca cccttcatct tctcagagga
1141 gaactcggcc ttagaatact ttggtgagat gttaaaggct gctggctaca atttctatgg
1201 caccgagagg ttatatagtg gcatcagtgg gctagaactg gaagcagaca tcttcatagg
1261 agtggtttat tatcagcgct tacgccatat ggtctcagac aaatttcaag taaggacaac
1321 tggagcccga gacagagtca ccaaccagcc tattggggga agaaatgtcc agggtggaat
1381 ccgttttggg gagatggaac gggatgcgct tttagctcat ggtacatctt ttctccttca
1441 tgaccgcctc ttcaactgct cagatcggtc ggtagcccat gtgtgtgtga agtgtggcag
1501 tttactctct ccactgttgg agaagccacc cccttcttgg tctgccatgc gcaacagaaa
1561 atacaactgt actctgtgta gtcgcagtga cactatcgat actgtttctg tgccttatgt
1621 ttttcggtat tttgtagctg aactggcagc tatgaacatc aaagtgaaac tggatgttgt
1681 ttaacttgat gttgaccttt tggattaaga ggactatcag attaaagcaa aatgtaattt
1741 taattcaatg aagatatcat taccaggtta ctcttgagat ttttcaacgg tgttagaact
1801 ctcaaccaag acctgaaaac caagtatgca aggtttctga atctctctgg tagattaact
1861 attgacaatg attttctgtt atctttgttc aaaaagttca tgtcttctca aaatatgaaa
1921 tattgataaa tggaagagca tacggtgaca agtctccttt ccaaccccag gttccctaca
1981 ccctgctctc agcaggcagt gagtgtcaca cacctgttaa tccatcttga gcaggacagt
2041 actatacaaa tagaatgcaa gctgtaatgt aattttatat tttcttatag ccacgttgaa
2101 gtaaaaacaa acaggtacag tgttttttac cagctttata gaagtacagt tgttacatat
2161 ttaatgaata caatttgatg ggtctgacta tatgcacaca cctttgatac catcaccaca
2221 atcagggtaa taaacatacc tgtcatctcc aaaaaaaaaa aaaaa
//