LOCUS BC073849 2001 bp mRNA linear HUM 03-JAN-2005
DEFINITION Homo sapiens suppressor of Ty 16 homolog (S. cerevisiae), mRNA
(cDNA clone IMAGE:4524275), partial cds.
ACCESSION BC073849
VERSION BC073849.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2001)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19924176.
FEATURES Location/Qualifiers
source 1..2001
/db_xref="H-InvDB:HIT000265074"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4524275"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2001
/gene="SUPT16H"
/gene_synonym="CDC68"
/gene_synonym="FACT"
/gene_synonym="FACTP140"
/gene_synonym="FLJ10857"
/gene_synonym="FLJ14010"
/gene_synonym="SPT16/CDC68"
/db_xref="GeneID:11198"
/db_xref="MIM:605012"
CDS 74..>2001
/gene="SUPT16H"
/gene_synonym="CDC68"
/gene_synonym="FACT"
/gene_synonym="FACTP140"
/gene_synonym="FLJ10857"
/gene_synonym="FLJ14010"
/gene_synonym="SPT16/CDC68"
/codon_start=1
/product="SUPT16H protein"
/protein_id="AAH73849.1"
/db_xref="GeneID:11198"
/db_xref="MIM:605012"
/translation="MAVTLDKDAYYRRVKRLYSNWRKGEDEYANVDAIVVSVGVDEEI
VYAKSTALQTWLFGYELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPA
ITLLIREKNESNKSSFDKMIEAIKESKNGKKIGVFSKDKFPGEFMKSWNDCLNKEGFD
KIDISAVVAYTIAVKEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLA
ESVEKAIEEKKYLAGADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGAITCAMG
IRFKSYCSNLVRTLMVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVK
KQKPELLNKITKNLGFGMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGK
KPEEKTYALFIGDTVLVDEDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDL
LGRGSRAALLTERTRNEMTAEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQKARKS
NVSYKNPSLMPKEPHIREMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYT
YLRINFYCPGSALGRNEGNIFPNPEATFVKEITYRASNIKAPGEQTVPALNLQNAFRI
IKEVQKRYKTREAEKKKK"
BASE COUNT 682 a 362 c 496 g 461 t
ORIGIN
1 gggccgagag cgggtggctg agccgggacc tcgcgtgatt ctcggaaccc gaggagaagc
61 ggcgtccggg gctatggctg tgactctgga caaagacgct tattatcggc gagtgaagag
121 actgtacagc aattggcgga aaggagaaga tgagtatgcc aacgttgatg ccattgttgt
181 atcagtgggt gttgatgaag aaattgttta tgccaaatca actgccttac agacatggct
241 ctttggttat gaactaactg atactatcat ggtcttttgt gatgacaaaa tcatctttat
301 ggccagcaag aaaaaagtgg agttcttgaa acagattgcc aacactaagg gcaatgagaa
361 tgctaatgga gcccctgcca tcacactgct aatacgagaa aagaatgaaa gtaataagag
421 tagctttgac aaaatgattg aagccattaa agaaagcaag aatggcaaga agattggagt
481 gttcagcaaa gacaaattcc ctggagagtt catgaagagc tggaatgact gcctcaacaa
541 agaaggcttt gacaaaatag atatcagtgc agttgtggca tataccatcg ctgtaaagga
601 ggatggggag ctcaacctaa tgaagaaagc agccagcatc acttctgaag tcttcaacaa
661 attcttcaag gaaagagtca tggaaatagt tgatgcagat gagaaagttc gacacagcaa
721 actggctgag tctgtggaaa aggccattga agagaaaaaa taccttgctg gggcagaccc
781 ttctactgtg gaaatgtgtt accctcctat cattcagagt ggtggcaact ataatctcaa
841 gttcagtgtg gtgagtgaca agaatcatat gcactttggg gctatcactt gtgccatggg
901 tattcgcttc aagtcttact gctccaacct tgttcgcact ttgatggttg atccttctca
961 agaagttcaa gaaaattata actttttgct ccagcttcaa gaggagctgc tgaaggaatt
1021 aagacatggt gtgaagatat gtgacgtgta taacgctgtc atggacgtgg ttaaaaagca
1081 gaagccagaa ctgctgaaca aaattaccaa aaacctaggg tttgggatgg gaattgaatt
1141 ccgtgaaggc tccctagtaa tcaatagcaa aaatcaatac aaactgaaga aaggaatggt
1201 tttcagcatc aatttaggat tctcagacct gactaacaag gaggggaaaa agccagaaga
1261 gaaaacctat gccctgttca ttggtgacac agtgcttgtg gatgaggatg gcccagctac
1321 tgttctcact tctgtgaaga agaaagtgaa gaatgtgggg attttcctaa agaatgaaga
1381 tgaggaagaa gaggaggagg agaaagatga ggcagaggac cttttgggaa gaggttctcg
1441 ggcagcatta cttacagaaa gaacaagaaa tgaaatgact gcagaagaga agcgaagagc
1501 acatcagaaa gaactagcgg ctcaactcaa tgaagaagca aagaggcgat tgactgaaca
1561 aaagggagaa cagcagattc agaaagctcg caagtctaat gtgtcctata aaaacccatc
1621 tctgatgcct aaggaaccgc atattcggga aatgaagatc tacatcgata agaaatatga
1681 gactgtaata atgcccgtgt ttggcattgc aacaccgttt cacattgcca caatcaagaa
1741 tataagtatg tccgtggaag gagattatac ttacttgcga atcaactttt attgcccagg
1801 cagtgctctg ggcaggaatg aaggcaacat ctttcctaac cctgaagcga cttttgtcaa
1861 ggaaattaca taccgagcat caaatattaa ggcacccgga gaacagacag taccagcctt
1921 gaaccttcag aatgctttcc gaattattaa agaagtacag aaacgttata aaactcgaga
1981 agctgaaaaa aaaaaaaaaa a
//