LOCUS BC073806 2561 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SMYD family member 5, mRNA (cDNA clone MGC:88829 IMAGE:6671194), complete cds. ACCESSION BC073806 VERSION BC073806.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2561) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2561) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (23-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: p Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50052980. FEATURES Location/Qualifiers source 1..2561 /db_xref="H-InvDB:HIT000265032" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:88829 IMAGE:6671194" /tissue_type="Ovary, teratocarcinoma" /clone_lib="NIH_MGC_109" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2561 /gene="SMYD5" /gene_synonym="NN8-4AG" /gene_synonym="RRG1" /db_xref="GeneID:10322" /db_xref="HGNC:HGNC:16258" CDS 354..1262 /gene="SMYD5" /gene_synonym="NN8-4AG" /gene_synonym="RRG1" /codon_start=1 /product="SMYD family member 5" /protein_id="AAH73806.1" /db_xref="GeneID:10322" /db_xref="HGNC:HGNC:16258" /translation="MYCSAECRLAATEQYHQVLCPGPSQDDPLHPLNKLQEAWRSIHY PPETASIMLMARMVATVKQAKDKDRWIRLFSQFCNKTANEEEEIVHKLLGDKFKGQLE LLRRLFTEALYEEAVSQWFTPDGFRSLFALVGTNGQGIGTSSLSQWVHACDTLELKPQ DREQLDAFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAETSFPENNFLLH VTALEDIKPGEEICISYLDCCQRERSRHSRHKILRENYLFVCSCPKCLAEADEPNVTS EEEEEEEEEEEGEPEDAELGDEMTDV" BASE COUNT 574 a 745 c 688 g 554 t ORIGIN 1 ccaagatggc ggcctccatg tgcgacgtgt tctccttctg cgtgggcgtg gcgggccgcg 61 cgcgggtctc cgtggaagtc cgtttcgtga gcagcgccaa gggaaagggg ctgtttgcca 121 cacagctcat ccggaagggg gagaccatct tcgtagaacg gcccctggtg gctgcacagt 181 ttctctggaa tgcactttat cgctaccgag cctgtgacca ctgccttagg gcactagaga 241 aggcagagga gaatgcccag aggctgaccg ggaaaccagg ccaggttctg cctcacccag 301 agctgtgcac tgtgcgcaaa gacctccacc agaactgtcc ccattgccaa gtgatgtact 361 gcagtgcaga atgtcggttg gcagccactg agcaatacca ccaggtcctg tgcccaggcc 421 cctcccagga tgaccccttg catcctctca ataagcttca ggaggcatgg aggagtattc 481 actacccacc tgagactgca agcatcatgt tgatggctag gatggtggcc acagtgaagc 541 aggcgaagga caaggaccgt tggatcagac tcttttccca gttttgtaac aaaacagcca 601 atgaagagga ggaaattgtc cataaacttc tgggagacaa attcaagggc caactggaac 661 ttctgcggag actcttcaca gaggccctct atgaggaagc agtcagccag tggttcactc 721 cagatggatt ccggtctctc tttgctcttg ttgggaccaa tggccaagga atcgggacca 781 gctccctaag ccagtgggtc catgcctgtg acactctgga gttgaagcct caggaccgtg 841 agcagcttga cgccttcatt gaccagctat acaaggacat cgaggcagca actggagagt 901 ttcttaactg tgaaggatct ggcctctttg tgcttcagag ctgctgcaac cacagttgtg 961 tgcccaatgc agagacctcc tttccagaaa acaacttcct tttgcatgtc actgctctgg 1021 aggatattaa gccaggagag gaaatttgta tcagctactt ggactgctgt cagcgggagc 1081 gcagccgcca cagccgccac aagatcctca gggagaacta tctatttgtc tgttcctgtc 1141 ccaaatgcct ggcagaggct gatgaaccca atgtgacctc agaagaggaa gaggaagagg 1201 aggaggagga ggaaggagag ccagaagatg cagagctggg ggatgagatg actgatgtgt 1261 gatgttgccc tgcccagaaa gggccctgcc ctagaccctg ccagaaaagg gggctcttcc 1321 cccagagaag tggcttggag ggaacttccc actcccattg cctgctttcc ccattccagc 1381 cctctctgct agagggtagg agagagcctg gatctctggc cccaaccccc accagacctc 1441 atgccctgga cactgctgct gagttggctc agactctgca ctggcactga gcctttcaca 1501 actggcctcc ccttgaggtt cctccactct agggtttgag gggctggaat cagggccagg 1561 gcctaacagt gtttcttccc ctcggcccca cggcccatac tcaccccttc acctgaggct 1621 tctcccctct caacttgctg ttgatttctt ttgaggggta aaagaaagac cgagttcatt 1681 gaagcagaga tgggaggtgg tgaggcgtcc tcacctcccc ccaccacagc tgtggctggt 1741 aaggcaactg cttgaccact ggcccagcaa gcagaggcgg gcaggaggat ctgggcatcc 1801 tgagcccctt ccctgaggct gtctcctggg aatgctggac cagggggatt acttccccca 1861 cccacacccc catttggaca tctggggaag tggagattaa cccctccccc agactcgtgc 1921 cttgcctctc aggacctggc acagtggctg gccttatgga gtatggaaaa ggcctctgcc 1981 ttcctcagga gggacacata gtgggtcatc accctttctc acacctgctt cccaatgagc 2041 actcagcagc atggctgaga cctggggctt gacaggcctg cgctccttag attaggatgc 2101 tctggtattc ctggggccag ttaaaatggg tcagtgaggg gctctcctgg cctcaatctc 2161 catctttagg gtctccacag actaacattg aagtcttcca gaaacctcga ggagctgggc 2221 tagatacttc gagagtagcc ctgtcttgtc ccctcctacc cccagattag caccacccct 2281 ctcactcttg ggttggatgc tatgggaatt acaacccatc actcccaatg cctccctttc 2341 ctggaggagc ctgctgcatt ctcctgctga gggatcccag agagggcagg tgcccacccc 2401 acaggccctt tcctggacca tggagccagg tgaaacctgt ctggcccctt acccattggg 2461 ttcttactcc ttcacaacgg tcagcactcc tctcccagcc cccctgccca ctgttctcaa 2521 taaaatgtga gtggtgagag gccaaaaaaa aaaaaaaaaa a //