LOCUS BC073173 1560 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens regucalcin (senescence marker protein-30), mRNA (cDNA
clone MGC:87766 IMAGE:6186669), complete cds.
ACCESSION BC073173
VERSION BC073173.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1560)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1560)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68216153.
FEATURES Location/Qualifiers
source 1..1560
/db_xref="H-InvDB:HIT000264968"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87766 IMAGE:6186669"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1560
/gene="RGN"
/gene_synonym="RC"
/gene_synonym="SMP30"
/db_xref="GeneID:9104"
/db_xref="HGNC:HGNC:9989"
/db_xref="MIM:300212"
CDS 185..1084
/gene="RGN"
/gene_synonym="RC"
/gene_synonym="SMP30"
/codon_start=1
/product="regucalcin (senescence marker protein-30)"
/protein_id="AAH73173.1"
/db_xref="GeneID:9104"
/db_xref="HGNC:HGNC:9989"
/db_xref="MIM:300212"
/translation="MSSIKIECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDS
FTKQVQRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVDNDKKNNRF
NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSL
DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC
YNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQP
EAGGIFKITGLGVKGIAPYSYAG"
BASE COUNT 485 a 322 c 380 g 373 t
ORIGIN
1 cgggcccgtt cagccgggct ggctggtgcg ccctctgcaa agcctgcgcc agggaggagg
61 caggctcaac cttcagattc ccagggcctc tctgtcgctg tcgccgtcgc cgtcgcccga
121 ggtcccagcg gctctaccag attgttgtgg aggcctctca cccgcacaga tctcccctgc
181 gaccatgtct tccattaaga ttgagtgtgt tttgccagag aactgccggt gtggtgagtc
241 tccagtatgg gaggaagtgt ccaactctct gctctttgta gacattcctg caaaaaaggt
301 ttgccggtgg gattcattca ccaagcaagt acagcgagtg accatggatg ccccagtcag
361 ctccgtggct cttcgccagt cgggaggcta tgttgccacc attggaacaa agttctgtgc
421 tttgaactgg aaagaacaat cagcagttgt cttggccacg gtggataacg acaagaaaaa
481 caatcgcttc aatgatggga aggtggatcc cgccgggagg tactttgctg gcaccatggc
541 tgaggaaaca gctccagcag ttcttgagcg gcaccagggg gccctgtact ccctctttcc
601 tgatcaccac gtgaaaaagt actttgacca ggtggacatt tccaatggtt tggattggtc
661 gctagaccac aaaatcttct attacattga cagcctgtcc tactccgtgg atgcctttga
721 ctatgacctg cagacaggac agatctccaa ccgcagaagt gtttacaagc tagaaaagga
781 agaacaaatc ccagatggaa tgtgtattga tgctgagggg aagctctggg tggcctgtta
841 caatggagga agagtgattc gtttagatcc tgtgacaggg aaaagacttc aaactgtgaa
901 gttgcctgtt gataaaacaa cttcatgctg ctttggaggg aagaattact ctgaaatgta
961 tgtgacctgc gcccgggatg ggatggaccc cgagggtctt ttgaggcaac ctgaagctgg
1021 tggaattttc aagataactg gtctgggggt caaaggaatt gctccctact cctatgcggg
1081 atgaggacag gtcttctttc ctgccagagg gagctctgaa gacaactaga gaattctggg
1141 cctgaaattt caatctagtt agaaagaaaa atgaggcaat gattttatta acagcgttaa
1201 gttttaattt acaactttta aaaggcagag catttttaac aaggggtgac aggtggtttt
1261 gataacacac ttataaggct ttctgtaaaa ggtactatag aagggcgaag aatcgttcaa
1321 ctgtcaatca gcctcttgat tctttgtaaa ttgccagggt gggtgggtac atatctcttc
1381 ttgattctgc atttcatact taactatatt aaagcttcaa ggaacaataa atagtaacct
1441 ggtaatgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//