LOCUS BC073169 973 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens chromosome 17 open reading frame 42, mRNA (cDNA clone IMAGE:6192569), complete cds. ACCESSION BC073169 VERSION BC073169.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 973) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 973) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. James R. Lupski cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 174 Row: n Column: 16 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..973 /db_xref="H-InvDB:HIT000264964" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6192569" /tissue_type="Peripheral Nervous System, sympathetic trunk" /clone_lib="Lupski_sympathetic_trunk" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..973 /gene="C17orf42" /db_xref="GeneID:79736" /db_xref="HGNC:HGNC:26223" CDS 300..776 /gene="C17orf42" /codon_start=1 /product="C17orf42 protein" /protein_id="AAH73169.1" /db_xref="GeneID:79736" /db_xref="HGNC:HGNC:26223" /translation="MRGIYSSSVYLEEISSIISKMPKADFYVLKKTGLSIQNSSLFPI LLHFHIMEAMLYALLNKTFAQDGQHQVLSMNRNAVGKHFELMIGDSRTSGKELVKQFL FDSILKADPRVFFPSDKIVHYRQMFLSTELQRVEELYDSLLQAIAFYELAVFDSQP" BASE COUNT 323 a 171 c 194 g 285 t ORIGIN 1 attgcttcgt ggaagaaggt ccatcaatat cgtagagcac agagaaaact ttgggccatt 61 tcagaattta gagagtttaa tgaatgtgcc cttgtttaag tataaaagta cagttcaagt 121 ttgtaactcc atactttgtc caaagactgg acgggaaaaa agaaagtcac cggaaaaccg 181 gttcctgaga aagctcctca aaccagacat agaaagagaa agacttaaga attgcctggg 241 ctcaccttga tcgtaagttg acagtgctgg actggcagca aagtgaccgt tggagtttaa 301 tgagaggaat atactcatca tcagtctatt tagaagagat ttcctcgatc atttcaaaga 361 tgcctaaagc agatttctat gttctgaaaa aaacaggact ttccattcag aactcatctc 421 tgtttccaat actgttacat tttcatatca tggaagccat gctgtatgcc ttattaaata 481 aaacttttgc ccaggatggg cagcatcagg tgctgagcat gaatcgaaat gcagtgggga 541 agcattttga actgatgatt ggtgactccc ggactagtgg aaaagagcta gtgaagcagt 601 ttctcttcga ttctatactg aaggcggatc ctcgggtgtt cttcccatca gataaaatag 661 ttcactacag acagatgttt ttatctactg aactacaaag agtagaagag ctttatgatt 721 cattattaca agctattgcc ttctatgaat tagcagtgtt tgactctcag ccttagaatt 781 ctgaggttaa cgtgctaaag tataattatt agctctaacg taacaccaac tgttgtgaac 841 atccatgtta ttggaaaaga acacattttc agtgtatttt agatgtttaa attctgactt 901 ttggctatta aatggtttac acaataagcc aagaccaaat caataaacat tttatgagaa 961 aaaaaaaaaa aaa //