LOCUS BC073168 1117 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB13, member RAS oncogene family, mRNA (cDNA clone
MGC:88017 IMAGE:6193572), complete cds.
ACCESSION BC073168
VERSION BC073168.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1117)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1117)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34850075.
FEATURES Location/Qualifiers
source 1..1117
/db_xref="H-InvDB:HIT000264963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88017 IMAGE:6193572"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1117
/gene="RAB13"
/gene_synonym="GIG4"
/db_xref="GeneID:5872"
/db_xref="HGNC:HGNC:9762"
/db_xref="MIM:602672"
CDS 46..657
/gene="RAB13"
/gene_synonym="GIG4"
/codon_start=1
/product="RAB13, member RAS oncogene family"
/protein_id="AAH73168.2"
/db_xref="GeneID:5872"
/db_xref="HGNC:HGNC:9762"
/db_xref="MIM:602672"
/translation="MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGID
FKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNW
MKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDE
AFSSLARDILLKSGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG"
BASE COUNT 342 a 235 c 323 g 217 t
ORIGIN
1 tgccgggcgc tccccacccc tcccccggct cccccggtgt ccgccatggc caaagcctac
61 gaccacctct tcaagttgct gctgatcggg gactcggggg tgggcaagac ttgtctgatc
121 attcgctttg cagaggacaa cttcaacaac acttacatct ccaccatcgg aattgatttc
181 aagatccgca ctgtggatat agaggggaag aagatcaaac tacaagtctg ggacacggct
241 ggccaagagc ggttcaagac aataactact gcctactacc gtggagccat gggcattatc
301 ctagtatacg acatcacgga tgagaaatct ttcgagaata ttcagaactg gatgaaaagc
361 atcaaggaga atgcctcggc tggggtggag cgcctcttgc tggggaacaa atgtgacatg
421 gaggccaaga ggaaggtgca gaaggagcag gccgataagt tggctcgaga gcatggaatc
481 cgatttttcg aaactagtgc taaatccagt atgaatgtgg atgaggcttt tagttccctg
541 gcccgggaca tcttgctcaa gtcaggaggc cggagatcag gaaacggcaa caagcctccc
601 agtactgacc tgaaaacttg tgacaagaag aacaccaaca agtgctccct gggctgagga
661 ccctttcttg cctccccacc ccggaagctg aacctgaggg agacaacggc agagggagtg
721 agcaggggag aaatagcaga ggggcttgga gggtcacata ggtagatggt aaagagaatg
781 aggagaaaaa ggagaaaagg gaaaagcaga aaggaaaaaa aggaagagag aggaagggag
841 aagggagagg aatgaattga ggaagtgaaa gaaggcaagg aggtaggaag agagggagga
901 ggaaaggaag gagagatgcc tcaggcttca gaccttacct gggttttcag ggcaaacata
961 aatgtaaata cactgattta ttctgttact agatcaggtt ttagggtcct gcaaaaggct
1021 agctcggcac tacactaggg aatttgctcc tgttctgtca cttgtcatgg tctttcttgg
1081 tattaaaggc caccatttgc acaaaaaaaa aaaaaaa
//