LOCUS BC072673 530 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretoglobin, family 3A, member 1, mRNA (cDNA clone
MGC:87867 IMAGE:5753142), complete cds.
ACCESSION BC072673
VERSION BC072673.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 530)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 530)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50363225.
FEATURES Location/Qualifiers
source 1..530
/db_xref="H-InvDB:HIT000264912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87867 IMAGE:5753142"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..530
/gene="SCGB3A1"
/gene_synonym="HIN-1"
/gene_synonym="HIN1"
/gene_synonym="LU105"
/gene_synonym="MGC87867"
/gene_synonym="PnSP-2"
/gene_synonym="UGRP2"
/db_xref="GeneID:92304"
/db_xref="HGNC:HGNC:18384"
/db_xref="MIM:606500"
CDS 22..336
/gene="SCGB3A1"
/gene_synonym="HIN-1"
/gene_synonym="HIN1"
/gene_synonym="LU105"
/gene_synonym="MGC87867"
/gene_synonym="PnSP-2"
/gene_synonym="UGRP2"
/codon_start=1
/product="secretoglobin, family 3A, member 1"
/protein_id="AAH72673.1"
/db_xref="GeneID:92304"
/db_xref="HGNC:HGNC:18384"
/db_xref="MIM:606500"
/translation="MKLAALLGLCVALSCSSAAAFLVGSAKPVAQPVAALESAAEAGA
GTLANPLGTLNPLKLLLSSLGIPVNHLIEGSQKCVAELGPQAVGAVKALKALLGALTV
FG"
BASE COUNT 137 a 171 c 149 g 73 t
ORIGIN
1 cgcgccccga gcccccgcgc catgaagctc gccgccctcc tggggctctg cgtggccctg
61 tcctgcagct ccgctgctgc tttcttagtg ggctcggcca agcctgtggc ccagcctgtc
121 gctgcgctgg agtcggcggc ggaggccggg gccgggaccc tggccaaccc cctcggcacc
181 ctcaacccgc tgaagctcct gctgagcagc ctgggcatcc ccgtgaacca cctcatagag
241 ggctcccaga agtgtgtggc tgagctgggt ccccaggccg tgggggccgt gaaggccctg
301 aaggccctgc tgggggccct gacagtgttt ggctgagccg agactggagc atctacacct
361 gaggacaaga cgctgcccac ccgcgagggc tgaaaacccc gccgcgggga ggaccgtcca
421 tccccttccc ccggcccctc tcaataaacg tggttaagag caaaaaaaaa aaaaaaaaaa
481 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//