LOCUS BC072452 2400 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens family with sequence similarity 107, member B, mRNA
(cDNA clone IMAGE:6182033), complete cds.
ACCESSION BC072452
VERSION BC072452.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: m Column: 4
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2400
/db_xref="H-InvDB:HIT000264896"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6182033"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2400
/gene="FAM107B"
/gene_synonym="FLJ45505"
/gene_synonym="MGC11034"
/db_xref="GeneID:83641"
/db_xref="HGNC:HGNC:23726"
CDS 302..697
/gene="FAM107B"
/gene_synonym="FLJ45505"
/gene_synonym="MGC11034"
/codon_start=1
/product="FAM107B protein"
/protein_id="AAH72452.1"
/db_xref="GeneID:83641"
/db_xref="HGNC:HGNC:23726"
/translation="MAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRG
LAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDLEIELLKRQQKLEQLELEKQKLQ
EEQENAPEFVKVKGNLRRTGQEVAQAQES"
BASE COUNT 712 a 485 c 569 g 634 t
ORIGIN
1 gcggggccgc ggggagcgag agccgccctg cgccggactg gcttgcgggc cgggccgccg
61 cccccggagc cgccctcgcg ccgcctcggg ccgccgccga gcagtcgggc cgctgggcgc
121 cgccgcgggc gccgggagcg agctgggagg gagccgcgcg cctttgtgcg cgcgccgagg
181 agaatgcagt tgaaactaat tttgtggata gagaaactgt tggaactgct ttacaaagta
241 ttttaacagc ccacctgagg atattgacca taaggactca tatctcatta caagaagcat
301 catggccgag ccagactaca tagaagatga caatcctgaa ctcattaggc ctcagaaact
361 gatcaatcct gtaaaaacct cccggaacca tcaagatctt cacagagaac ttcttatgaa
421 tcaaaaaagg ggtcttgctc ctcagaacaa accagaattg cagaaggtga tggaaaaaag
481 aaaacgagac caagtaataa agcagaagga agaagaagca cagaagaaga aatctgactt
541 ggaaatagag ctattaaaac ggcagcagaa gttggagcag cttgaacttg agaagcagaa
601 attgcaagaa gagcaagaaa atgcccccga gtttgtgaag gtgaaaggca atctcaggag
661 aacaggccaa gaagtcgccc aagcccagga gtcctaggct gaggctgcac caagacctcg
721 tgtgtcaccc cacagagctg tctgtgggtg ccttctcaat ctcagggcaa aagcccctgg
781 agaatattcc agccagcaga gaattttgac ttgcagtagg atttggtttg attttcctac
841 gatctgggtg gatgccttgc ctgtgacagt tgcagttcct attcgccaaa tgaagggcag
901 tgccccgcac gtaagttgga atgatggacc tgtgttcaga gacttaacag aaccaacaag
961 caaaacaagt gagaacagga aaaaggaaga ggacactgga atcaattctt gagagttgca
1021 ctacttggtt tttcttccat tccaagtttc gtgggaccca gagccttttt tcttttaaaa
1081 gctaaaaaac aagtgtttaa ttcctctttt tgttatctgt tagataattg agatcaccta
1141 gaaatgcgtt taatctgttc actcactgta aattttgagg acccagaatt gtcttgttta
1201 atttatactt tcacccctgt tgcagttaac accagagaag gaacgtgaat gtcgagcaca
1261 gccactaccc ttgttggcac ttaatttaga aatagggtga gaagtttaaa agcccatctt
1321 gattttattt tcattccttt tggttctctg tgtaataata gcaggctaca tagtgacatt
1381 ccagttccaa gaaggtacat cctgtccatt cattaattgc tttgattact aggagggttt
1441 ctgttcagtt ttgtttttaa atgtcttgct gatctagttc tttcagatgg aataaccttc
1501 cagtccctta gagagtggaa ctagtccata taacccagct tcagtagcaa aagtagaagc
1561 cgccacatct tttcatttct ccaagaggag agtggggaag gttcccatga ccagctgggc
1621 agtcaggatt tctctaggca ttctaatgtg aaataagtgt agactgctgt caaggaggct
1681 tcatcagaag atgtatagca tttgaatgtc taatgataat gcatatcatt agaatccaag
1741 ctttgaaaat ttctgattaa tgctcatgta tttctttatc tttgtttttc cttgtgaaga
1801 aagactttca ccactgtctg agtgatgatg ctgttgataa ggatgatgtc gatgactact
1861 atattgcatc tctcaggaac agctgatggg aagggagggg ctgctgagtt gccttgttct
1921 agctagcagc acgctcctca gagagggggc cgagttacag acagcagccg cattctcatg
1981 caaaattagt tttaaactgc tagtgtgggc atcggtacct tttgcctggg tgataccgaa
2041 gaattgttga ggatttagta tgctccgtag agacagttca gccagtcatt tctgcattgg
2101 agagacttct catactttct ttgaagactc atagaaagct ggatctagag cttttgaatc
2161 cttaattagc acagtagaaa ttagctttct atgggaatgc tttagtgtta gcagttgaca
2221 attaggccca tattcaatct gaatgggaac aaaagtaaat gcaatgataa tatactgcta
2281 gttagagaaa catgttagtt gattatacct gaaatggatt atttatctca tcagcaagta
2341 ttatttgaat aaaatgagaa atgcttaaga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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