LOCUS BC072427 1530 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small nuclear ribonucleoprotein D1 polypeptide 16kDa,
mRNA (cDNA clone MGC:87720 IMAGE:6464946), complete cds.
ACCESSION BC072427
VERSION BC072427.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1530)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1530)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: o Column: 13.
FEATURES Location/Qualifiers
source 1..1530
/db_xref="H-InvDB:HIT000264872"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87720 IMAGE:6464946"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1530
/gene="SNRPD1"
/gene_synonym="HsT2456"
/gene_synonym="SMD1"
/db_xref="GeneID:6632"
/db_xref="HGNC:HGNC:11158"
/db_xref="MIM:601063"
CDS 49..408
/gene="SNRPD1"
/gene_synonym="HsT2456"
/gene_synonym="SMD1"
/codon_start=1
/product="small nuclear ribonucleoprotein D1 polypeptide
16kDa"
/protein_id="AAH72427.1"
/db_xref="GeneID:6632"
/db_xref="HGNC:HGNC:11158"
/db_xref="MIM:601063"
/translation="MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVK
MTLKNREPVQLETLSIRGNNIRYFILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGR
GRGRGRGRGRGRGGPRR"
BASE COUNT 466 a 237 c 344 g 483 t
ORIGIN
1 gaaggattct gtgtgctgtc ggacccagag ggtgacggcg ccgctaggat gaagctcgtg
61 agatttttga tgaaattgag tcatgaaact gtaaccattg aattgaagaa cggaacacag
121 gtccatggaa caatcacagg tgtggatgtc agcatgaata cacatcttaa agctgtgaaa
181 atgaccctga agaacagaga acctgtacag ctggaaacgc tgagtattcg aggaaataac
241 attcggtatt ttattctacc agacagttta cctctggata cactacttgt ggatgttgaa
301 cctaaggtga aatctaagaa aagggaagct gttgcaggaa gaggcagagg aagaggaaga
361 ggaagaggac gtggccgtgg cagaggaaga gggggtccta ggcgataatg tctctcaaga
421 tttcaaagtc atatgagatt tgggatattt tttgtacagg ttgtgtttgt ttatgtcagt
481 ttttaataaa cataaatgtg ggacagagct gtctatttag tatatcaaag ttttagtagt
541 ttcctccaca ttcacgaaat taccacagtg agagctaagc atttctactg ggcagtttca
601 tttttagttg atcaggtttt aagtttttga actaaaattt ttctttttct ttttatgatg
661 aataaggtta aaataaaagc cttagacaaa ttaaatttgg cagagtttaa ttgagcaaag
721 gacaattcac aaatcaggta gcccctgaac cataataggc tcagaggctt cagcccagct
781 gcatagttga agatttatgg acagaaggaa agtgatgtat ggaaaatgga agtgagatac
841 agcaacagcc ggattagtta cagttcagcg tttgccttat ttgaatatgg tttgaacagt
901 tcgctgtctt tggttggctg aaacttagtg attgccacaa gagtagggta ccgtctgttt
961 acacgtccag ttaggctaca gttctatgta ctgagaaacc tttaagctga acttgagata
1021 tgtaaagaga ctttaggcta aacttaacaa tatatatagg atatataccc ttctacttca
1081 catgcactga atatgcattt tattgcttta ctcttcattc tgtggcacct acccacaggg
1141 gaagtaagaa gtttgttttg gtatttcgga aactaaagtc cttatgggat ggggtctaga
1201 attgattctc ctttcctgag ttttactcca cggagtctta ggtacctggt aaaaagttgt
1261 cttctaaatt aagggtcatt gctttgttgt ctagctgcta atgtcttact tttgtttctt
1321 ttgcttttta atcagttctt aataggatat agttttatgt tttccaagtt ataacttgga
1381 gttaatggtc actagattat cagttatgag cagtgttaaa atctcctatt aatgtgtaat
1441 gtacctgtca gtgcctcctt tattaagggg ttctttgaga ataaaagaga aaagacctac
1501 tttatttgac agcaaaaaaa aaaaaaaaaa
//