LOCUS BC072403 1659 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens xylosylprotein beta 1,4-galactosyltransferase,
polypeptide 7 (galactosyltransferase I), mRNA (cDNA clone MGC:87980
IMAGE:6094074), complete cds.
ACCESSION BC072403
VERSION BC072403.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1659)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1659)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6005951.
FEATURES Location/Qualifiers
source 1..1659
/db_xref="H-InvDB:HIT000264848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87980 IMAGE:6094074"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1659
/gene="B4GALT7"
/gene_synonym="B4GAL-T7"
/gene_synonym="beta4Gal-T7"
/gene_synonym="XGALT-1"
/gene_synonym="XGALT1"
/gene_synonym="XGPT1"
/db_xref="GeneID:11285"
/db_xref="HGNC:HGNC:930"
/db_xref="MIM:604327"
CDS 83..1066
/gene="B4GALT7"
/gene_synonym="B4GAL-T7"
/gene_synonym="beta4Gal-T7"
/gene_synonym="XGALT-1"
/gene_synonym="XGALT1"
/gene_synonym="XGPT1"
/codon_start=1
/product="xylosylprotein beta 1,4-galactosyltransferase,
polypeptide 7 (galactosyltransferase I)"
/protein_id="AAH72403.1"
/db_xref="GeneID:11285"
/db_xref="HGNC:HGNC:930"
/db_xref="MIM:604327"
/translation="MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFF
SLLWLQLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFR
ERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIA
MHDVDLLPLNEELDYGFPEAGPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMS
NRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQ
EQFKVDREGGLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS"
BASE COUNT 314 a 530 c 509 g 306 t
ORIGIN
1 ggcggaggcg ccgcgtaggc ccgggaggcc gggccggccg ggctgcgagc gcctgcccca
61 tgcgccgccg cctctccgca cgatgttccc ctcgcggagg aaagcggcgc agctgccctg
121 ggaggacggc aggtccgggt tgctctccgg cggcctccct cggaagtgtt ccgtcttcca
181 cctgttcgtg gcctgcctct cgctgggctt cttctcccta ctctggctgc agctcagctg
241 ctctggggac gtggcccggg cagtcagggg acaagggcag gagacctcgg gccctccccg
301 tgcctgcccc ccagagccgc cccctgagca ctgggaagaa gacgcatcct ggggccccca
361 ccgcctggca gtgctggtgc ccttccgcga acgcttcgag gagctcctgg tcttcgtgcc
421 ccacatgcgc cgcttcctga gcaggaagaa gatccggcac cacatctacg tgctcaacca
481 ggtggaccac ttcaggttca accgggcagc gctcatcaac gtgggcttcc tggagagcag
541 caacagcacg gactacattg ccatgcacga cgttgacctg ctccctctca acgaggagct
601 ggactatggc tttcctgagg ctgggccctt ccacgtggcc tccccggagc tccaccctct
661 ctaccactac aagacctatg tcggcggcat cctgctgctc tccaagcagc actaccggct
721 gtgcaatggg atgtccaacc gcttctgggg ctggggccgc gaggacgacg agttctaccg
781 gcgcattaag ggagctgggc tccagctttt ccgcccctcg ggaatcacaa ctgggtacaa
841 gacatttcgc cacctgcatg acccagcctg gcggaagagg gaccagaagc gcatcgcagc
901 tcaaaaacag gagcagttca aggtggacag ggagggaggc ctgaacactg tgaagtacca
961 tgtggcttcc cgcactgccc tgtctgtggg cggggccccc tgcactgtcc tcaacatcat
1021 gttggactgt gacaagaccg ccacaccctg gtgcacattc agctgagctg gatggacagt
1081 gaggaagcct gtacctacag gccatattgc tcaggctcag gacaaggcct caggtcgtgg
1141 gcccagctct gacaggatgt ggagtggcca ggaccaagac agcaagctac gcaattgcag
1201 ccacccggcc gccaaggcag gcttgggctg ggccaggaca cgtggggtgc ctgggacgct
1261 gcttgccatg cacagtgatc agagagaggc tggggtgtgt cctgtccggg accccccctg
1321 ccttcctgct caccctactc tgacctcctt cacgtgccca ggcctgtggg tagtggggag
1381 ggctgaacag gacaacctct catcaccccc acttttgttc cttcctgctg ggctgcctcg
1441 tgcagagaca cagtgtaggg gccatgcagc tggcgtaggt ggcagttggg cctggtgagg
1501 gttaggactt cagaaaccag agcacaagcc ccacagaggg ggaacagcca gcaccgctct
1561 agctggttgt tgccatgccg gaatgtgggc ctagtgttgc cagatcttct gatttttcga
1621 aagaaactag aatgctggat tcttaaaaaa aaaaaaaaa
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