LOCUS BC072401 1741 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribulose-5-phosphate-3-epimerase, mRNA (cDNA clone
MGC:87755 IMAGE:6047438), complete cds.
ACCESSION BC072401
VERSION BC072401.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1741)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1741)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40385882.
FEATURES Location/Qualifiers
source 1..1741
/db_xref="H-InvDB:HIT000264846"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87755 IMAGE:6047438"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1741
/gene="RPE"
/gene_synonym="MGC2636"
/gene_synonym="RPE2-1"
/db_xref="GeneID:6120"
/db_xref="HGNC:HGNC:10293"
/db_xref="MIM:180480"
CDS 7..693
/gene="RPE"
/gene_synonym="MGC2636"
/gene_synonym="RPE2-1"
/codon_start=1
/product="ribulose-5-phosphate-3-epimerase"
/protein_id="AAH72401.1"
/db_xref="GeneID:6120"
/db_xref="HGNC:HGNC:10293"
/db_xref="MIM:180480"
/translation="MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFV
PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEATENPG
ALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV
HWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCS
EAAQKRSLDR"
BASE COUNT 524 a 303 c 378 g 536 t
ORIGIN
1 agcggtatgg cgtcgggctg caagattggc ccgtccatcc tcaacagcga cctggccaat
61 ttaggggccg agtgcctccg gatgctagac tctggggccg attatctgca cctggacgta
121 atggacgggc attttgttcc caacatcacc tttggtcacc ctgtggtaga aagccttcga
181 aagcagctag gccaggaccc tttctttgac atgcacatga tggtgtccaa gccagaacag
241 tgggtaaagc caatggctgt agcaggagcc aatcagtaca cctttcatct cgaggctact
301 gagaacccag gggctttgat taaagacatt cgggagaatg ggatgaaggt tggccttgcc
361 atcaaaccag gaacctcagt tgagtatttg gcaccatggg ctaatcagat agatatggcc
421 ttggttatga cagtggaacc ggggtttgga gggcagaaat tcatggaaga tatgatgcca
481 aaggttcact ggttgaggac ccagttccca tctttggata tagaggtcga tggtggagta
541 ggtcctgaca ctgtccataa atgtgcagag gcaggagcta acatgattgt gtctggcagt
601 gctattatga ggagtgaaga ccccagatct gtgatcaatc tattaagaaa tgtttgctca
661 gaagctgctc agaaacgttc tcttgatcgg tgaaaccata aggagcccag tgttcctgtt
721 catgaaatct cccttttact ggaaaacagg aatattgact accaaatcac aatgcaattg
781 aagccgtact gcttttttga gcagttattc attccagtga ttaaaactga ttgtgcagaa
841 tattctaaga ggtcagaaat tggtgtgtat aactacattt ttagtgatgc aatttattga
901 ttagtgagta agatactgtt tttattgaga gatttgattt ttataaagta aaaatacggc
961 tgcattaggg ttacaaacag aaaagtgtct taatgtctaa ggagggcata ttagctacac
1021 tacaaaaaca aattttgtct gtacttctga aaagaatttt gttgtttctc agctgttttc
1081 caaaagcaaa ggaagtcttt atggtttttt tctatttcat gttattgtga tttgtttata
1141 agtttgggtg gggtgcatac catattcttg gttcttaaaa tctatcactt ttcaccttat
1201 acttgatgtg tgaaaactat aaaaacaatg tgtgaaaccc aggggttcta aaatacaagc
1261 atagatttta tcagggtgtt ttgtcaaagc aggttattca gtgattcctc cccaccattc
1321 ttaagaacgt taaataatgc tgttgtgtta gctctgagta gaaaggaaaa agtaaaacct
1381 ctgtttggag gtaatattgg gttgaattct gactgcccct ttctagctgg acctttaaca
1441 aatcacccaa tcttttttgt gtttctctaa agtcatttat acattaaatg taattatagc
1501 aactgtgggg ttctgttgag aattaagagc taacactata tatgtaaagt ttccagtact
1561 agtcccagaa tttagaatat gctcaacaca aagtaaacag cattatataa gtttatattt
1621 ttgtgagtta taaagtactt tgatatattc tcattaaatc tgtaaatcac ctctataagt
1681 aagtggtaat aataaagcag atatttttgt ccccatttaa aaaaaaaaaa aaaaaaaaaa
1741 a
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