LOCUS BC072025 795 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) activator subunit 2
(PA28 beta), mRNA (cDNA clone MGC:88739 IMAGE:6270762), complete
cds.
ACCESSION BC072025
VERSION BC072025.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 795)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 795)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CGAP (Stanford)
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: j Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30410791.
FEATURES Location/Qualifiers
source 1..795
/db_xref="H-InvDB:HIT000264827"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88739 IMAGE:6270762"
/tissue_type="Liver, hepatocellular carcinoma"
/clone_lib="NIH_MGC_100"
/lab_host="DH10B"
/note="Vector: pOTB7"
gene 1..795
/gene="PSME2"
/gene_synonym="PA28B"
/gene_synonym="PA28beta"
/gene_synonym="REGbeta"
/db_xref="GeneID:5721"
/db_xref="HGNC:HGNC:9569"
/db_xref="MIM:602161"
CDS 15..734
/gene="PSME2"
/gene_synonym="PA28B"
/gene_synonym="PA28beta"
/gene_synonym="REGbeta"
/codon_start=1
/product="proteasome (prosome, macropain) activator
subunit 2 (PA28 beta)"
/protein_id="AAH72025.1"
/db_xref="GeneID:5721"
/db_xref="HGNC:HGNC:9569"
/db_xref="MIM:602161"
/translation="MAKPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLN
QLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEMETDKQEKKEVPKCGFLPGNEKVLS
LLALVKPEVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAF
QTTISKYFSERGDAVAKASKETHVMDYRALVHERDEAAYGELRAMVLDLRAFYAELYH
IISSNLEKIVNPKGEEKPSMY"
BASE COUNT 234 a 180 c 215 g 166 t
ORIGIN
1 gcgactgaag cagcatggcc aagccgtgtg gggtgcgcct gagcggggaa gcccgcaaac
61 aggtggaggt cttcaggcag aatcttttcc aggaggctga ggaattcctc tacagattct
121 tgccacagaa aatcatatac ctgaatcagc tcttgcaaga ggactccctc aatgtggctg
181 acttgacttc cctccgggcc ccactggaca tccccatccc agaccctcca cccaaggatg
241 atgagatgga aacagataag caggagaaga aagaagtccc taagtgtgga tttctccctg
301 ggaatgagaa agtcctgtcc ctgcttgccc tggttaagcc agaagtctgg actctcaaag
361 agaaatgcat tctggtgatt acatggatcc aacacctgat ccccaagatt gaagatggaa
421 atgattttgg ggtagcaatc caggagaagg tgctggagag ggtgaatgcc gtcaagacca
481 aagtggaagc tttccagaca accatttcca agtacttctc agaacgtggg gatgctgtgg
541 ccaaggcctc caaggagact catgtaatgg attaccgggc cttggtgcat gagcgagatg
601 aggcagccta tggggagctc agggccatgg tgctggacct gagggccttc tatgctgagc
661 tttatcatat catcagcagc aacctggaga aaattgtcaa cccaaagggt gaagaaaagc
721 catctatgta ctgaacccgg gactagaagg aaaataaatg atctatatgt tgtgtggaaa
781 aaaaaaaaaa aaaaa
//