LOCUS BC072016 2834 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens citrate synthase, mRNA (cDNA clone MGC:88727
IMAGE:6484456), complete cds.
ACCESSION BC072016
VERSION BC072016.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2834)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327624.
FEATURES Location/Qualifiers
source 1..2834
/db_xref="H-InvDB:HIT000264819"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88727 IMAGE:6484456"
/tissue_type="Prostate, carcinoma"
/clone_lib="NIH_MGC_40"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2834
/gene="CS"
/db_xref="GeneID:1431"
/db_xref="HGNC:HGNC:2422"
/db_xref="MIM:118950"
CDS 34..1434
/gene="CS"
/codon_start=1
/product="citrate synthase"
/protein_id="AAH72016.1"
/db_xref="GeneID:1431"
/db_xref="HGNC:HGNC:2422"
/db_xref="MIM:118950"
/translation="MALLTAAARLLGTKNASCLVLAARHASASSTNLKDILADLIPKE
QARIKTFRQQHGKTVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQ
KLLPKAKGGEEPLPEGLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPT
NLHPMSQLSAAVTALNSESNFARAYAQGISRTKYWELIYEDSMDLIAKLPCVAAKIYR
NLYREGSGIGAIDSNLDWSHNFTNMLGYTDHQFTELTRLYLTIHSDHEGGNVSAHTSH
LVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLVWLTQLQKEVGKDVSDEKLRDYIWN
TLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPNDPMFKLVAQLYKIVPNVLLEQG
KAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRALGVLAQLIWSRALGFPLERPK
SMSTEGLMKFVDSKSG"
BASE COUNT 733 a 705 c 640 g 756 t
ORIGIN
1 tacctcccca ccagatcccg gagatcgccc gccatggctt tacttactgc ggccgcccgg
61 ctcttgggaa ccaagaatgc atcttgtctt gttcttgcag cccggcatgc cagtgcttcc
121 tccacgaatt tgaaagacat attggctgac ctgataccta aggagcaggc cagaattaag
181 actttcaggc agcaacatgg caagacggtg gtgggccaaa tcactgtgga catgatgtat
241 ggtggcatga gaggcatgaa gggattggtc tatgaaacat cagttcttga tcctgatgag
301 ggcatccgtt tccgaggctt tagtatccct gaatgccaga aactgctacc caaggctaag
361 ggtggggaag aacccctgcc tgagggctta ttttggctgc tggtaactgg acatatccca
421 acagaggaac aggtatcttg gctctcaaaa gagtgggcaa agagggcagc tctgccttcc
481 catgtggtca ccatgctgga caactttccc accaatctac accccatgtc tcagctcagt
541 gcagctgtta cagccctcaa cagtgaaagt aactttgccc gagcatatgc acagggtatc
601 agccgaacca agtactggga gttgatttat gaagactcta tggatctaat cgcaaagcta
661 ccttgtgttg cagcaaagat ctaccgaaat ctctacagag aaggcagcgg tattggggcc
721 attgactcta acctggactg gtctcacaat ttcaccaaca tgttaggcta tactgatcat
781 cagttcactg agctcacgcg cctgtacctc accatccaca gtgaccatga gggtggcaat
841 gtaagtgccc ataccagcca tttggtgggc agtgcccttt ccgaccctta cctgtccttt
901 gcagcagcca tgaacgggct ggcagggcct ctccatggac tggcaaatca ggaagtgctt
961 gtctggctaa cacagctgca gaaggaagtt ggcaaagatg tgtcagatga gaagttacga
1021 gactacatct ggaacacact caactcagga cgggttgttc caggctatgg ccatgcagta
1081 ctaaggaaga ctgatccgcg atatacctgt cagcgagagt ttgctctgaa acacctgcct
1141 aatgacccca tgtttaagtt ggttgctcag ctgtacaaga ttgtgcccaa tgtcctctta
1201 gagcagggta aagccaagaa tccttggccc aatgtagatg ctcacagtgg ggtgctgctc
1261 cagtattatg gcatgacgga gatgaattac tacacggtcc tgtttggggt gtcacgagca
1321 ttgggtgtac tggcacagct catctggagc cgagccttag gcttccctct agaaaggccc
1381 aagtccatga gcacagaggg tctgatgaag tttgtggact ctaagtcagg gtaaaactgg
1441 agactgggtg aaagtgacta ccagaaagtg aggaagccta aataaaaagt atacttttgt
1501 ttcagggggc ctttaaagac ttaagattaa attatatctg aggcactgat aatatgtttg
1561 aggttaaaat ataaattaag actttaaaag atgaaaaatg gtcccttctt ccctaatcag
1621 ctcccttccc ctgcctggta tgagttgccc atcatacgca tggtcctgga ggatgaccag
1681 gactaatgca tgtggtatga gtaggtttgg ccccctcact atctctagag tgagaatctg
1741 gctcctgttt ccatgggtca aagccggttg cagagaatct gtagtcactt tggagcttta
1801 gcttctctgc caagccctca ataagccagc aaaccaggac tctgcccctt ctgtttccat
1861 aggaatcatg ttggatagtc agctgtacca agccccttgg ccctctccca tgcacacaaa
1921 cacctcctag caagacctgt tggttagctg gacatgcttt ggcaattttt ttatactacc
1981 aagtgaccat aaaggcatgg catttgttgt gactggcacc caatgtttga tttttttttt
2041 aaaactatcc aattaaaatt aaggtctggg agtgttctgt ttcccattac tttaatactc
2101 acctcctccc agactttcta cacctgttgc acctcaggca gaggatgttc tggacctccc
2161 cctcttggtc cctactagag acctctcaac agatctgtgg gcccagtcat tgggttttat
2221 cagtgcttaa tgtgaactaa gttttttact tccacagaat acaagccact accttctgac
2281 ctccccaccc cccaccaacc cccatctttt aatatgctgt ggggcataga actccggaat
2341 gaccagcatg atattttcag agtcttgtcc ccggggtatt agcacctctt tttgaacagg
2401 gaattgattc aagattggac atggtctcct ctgattatca ggtactgggg ctgagggcat
2461 taaaaatagt aagcctccct cctcgtcccc tgcctcaaga aattgcctcc ttatttatca
2521 acatcttttt cctccctttc cctgagagct cacagtacaa tgtttcagaa gccccatttg
2581 cacaggtttt cagcaactca gaatgctcta cttctttttc tttgagaaag gattaagata
2641 cactcctgct gtgcccccat ctttcctcca aactcctgcc tgtgtttgtg tggataccca
2701 gtcccagaac cacactgttg agttggacac actgtaaacc cctgggtaac tgtcaagtca
2761 tgatggagac ttcaggttgt tctgtataaa atgcaaaata aatgttttta ttaacaaaaa
2821 aaaaaaaaaa aaaa
//