LOCUS BC072011 1209 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:88721 IMAGE:6647282), complete cds.
ACCESSION BC072011
VERSION BC072011.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1209)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1209)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: p Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50233912.
FEATURES Location/Qualifiers
source 1..1209
/db_xref="H-InvDB:HIT000264814"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88721 IMAGE:6647282"
/tissue_type="Breast, adenocarcinoma"
/clone_lib="NIH_MGC_107"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1209
/gene="HMGN2"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
CDS 86..358
/gene="HMGN2"
/gene_synonym="MGC5629"
/codon_start=1
/product="high-mobility group nucleosomal binding domain
2"
/protein_id="AAH72011.1"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 357 a 254 c 273 g 325 t
ORIGIN
1 gaacgacccc cggaccgacc aaagcccgcg cgccgctgca tcccgcgtcc agcacctacg
61 tcccgctgcc gtcgccgccg ccaccatgcc caagagaaag gctgaagggg atgctaaggg
121 agataaagca aaggtgaagg acgaaccaca gagaagatcc gcgaggttgt ctgctaaacc
181 tgctcctcca aagccagagc ccaagcctaa aaaggcccct gcaaagaagg gagagaaggt
241 acccaaaggg aaaaagggaa aagctgatgc tggcaaggag gggaataacc ctgcagaaaa
301 tggagatgcc aaaacagacc aggcacagaa agctgaaggt gctggagatg ccaagtgaag
361 tgtgtgcatt tttgataact gtgtacttct ggtgactgta cagtttgaaa tactattttt
421 tatcaatttt tataaaaatg cagaattttg ttttactttt tttttttttt aaaagctatg
481 ttgttagcac acagaacact tcattgttgt ttttggggga aggggcatat gtcactaata
541 gaatgtctcc aaagctggat tgatgtggag aaaacacctt tcccttctag ttttgagaga
601 cttcctcttg gctcccagga ggagggattc cctgactttg acacacatgg ccaccttggc
661 acaaaagcct tgtggtatag aaaaacaaat ttgtttttat gtcctcttct ccctttccat
721 ctttcagcat agacttaact cccttaagcc cagacatctg ttgagacctg acccctagtc
781 attggttacc agtgtgtcag gcaatctgga ctttccagtg atgccactga gatggcacct
841 gtcaaaagag cagtggttcc atttctagat tgtggatctt cagataaatt ctgccatttt
901 catttcactt cctgaaagtc agggtcggct tgtgaaaagt tgttaaacaa catgctaaat
961 gtgaaatgtc aaccctcact ctaaactttc cctgttcaga gcatcagatg aagacttcat
1021 tgggttttat agtggctttc tgatttttgg tagtccattg aagaagggag tttgaaagtt
1081 gttgtatact gttaacgatt gtctgcccat gtcctgcctg aaataccatg attgtttatg
1141 gaaagtatct ttaataaagc tggatacagt ttggcttgga aaaaaaaaaa aaaaaaaaaa
1201 aaaaaaaaa
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