LOCUS BC072010 1222 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens high-mobility group nucleosomal binding domain 2, mRNA
(cDNA clone MGC:88720 IMAGE:6273507), complete cds.
ACCESSION BC072010
VERSION BC072010.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1222)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1222)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: j Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50233912.
FEATURES Location/Qualifiers
source 1..1222
/db_xref="H-InvDB:HIT000264813"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88720 IMAGE:6273507"
/tissue_type="Skin, melanoma, melanotic"
/clone_lib="NIH_MGC_112"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1222
/gene="HMGN2"
/gene_synonym="MGC5629"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
CDS 90..362
/gene="HMGN2"
/gene_synonym="MGC5629"
/codon_start=1
/product="high-mobility group nucleosomal binding domain
2"
/protein_id="AAH72010.1"
/db_xref="GeneID:3151"
/db_xref="HGNC:HGNC:4986"
/db_xref="MIM:163910"
/translation="MPKRKAEGDAKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKA
PAKKGEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGDAK"
BASE COUNT 364 a 255 c 276 g 327 t
ORIGIN
1 gcgagaacga cccccggacc gaccaaagcc cgcgcgccgc tgcatcccgc gtccagcacc
61 tacgtcccgc tgccgtcgcc gccgccacca tgcccaagag aaaggctgaa ggggatgcta
121 agggagataa agcaaaggtg aaggacgaac cacagagaag atccgcgagg ttgtctgcta
181 aacctgctcc tccaaagcca gagcccaagc ctaaaaaggc ccctgcaaag aagggagaga
241 aggtacccaa agggaaaaag ggaaaagctg atgctggcaa ggaggggaat aaccctgcag
301 aaaatggaga tgccaaaaca gaccaggcac agaaagctga aggtgctgga gatgccaagt
361 gaagtgtgtg catttttgat aactgtgtac ttctggtgac tgtacagttt gaaatactat
421 tttttatcaa gttttataaa aatgcagaat tttgttttac tttttttttt tttttttaaa
481 agctatgttg ttagcacaca gaacacttca ttgttgtttt tgggggaagg ggcatatgtc
541 actaatagaa tgtctccaaa gctggattga tgtggagaaa acacctttcc cttctagttt
601 tgagagactt cctcttggct cccaggagga gggattccct gactttgaca cacatggcca
661 ccttggcaca aaagccttgt ggtatagaaa aacaaatttg tttttatgtc ctcttctccc
721 tttccatctt tcagcataga cttaactccc ttaagcccag acatctgttg agacctgacc
781 cctagtcatt ggttaccagt gtgtcaggca atctggactt tccagtgatg ccactgagat
841 ggcacctgtc aaaagagcag tggttccatt tctagattgt ggatcttcag ataaattctg
901 ccattttcat ttcacttcct gaaagtcagg gtcggcttgt gaaaagttgt taaacaacat
961 gctaaatgtg aaatgtcaac cctcactcta aactttccct gttcagagca tcagatgaag
1021 acttcattgg gttttatagt ggctttctga tttttggtag tccattgaag aagggagttt
1081 gaaagttgtt gtatactgtt aacgattgtc tgcccatgtc ctgcctgaaa taccatgatt
1141 gtttatggaa agtatcttta ataaagctgg atacagtttg gcttggaaaa aaaaaaaaaa
1201 aaaaaaaaaa aaaaaaaaaa aa
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