LOCUS       BC072008                1296 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens proteasome (prosome, macropain) 26S subunit,
            non-ATPase, 4, mRNA (cDNA clone MGC:88714 IMAGE:6285035), complete
            cds.
ACCESSION   BC072008
VERSION     BC072008.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1296)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1296)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-JUN-2004) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: CGAP (Stanford)
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 58 Row: k Column: 14
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5292160.
FEATURES             Location/Qualifiers
     source          1..1296
                     /db_xref="H-InvDB:HIT000264812"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:88714 IMAGE:6285035"
                     /tissue_type="Liver, hepatocellular carcinoma"
                     /clone_lib="NIH_MGC_100"
                     /lab_host="DH10B"
                     /note="Vector: pOTB7"
     gene            1..1296
                     /gene="PSMD4"
                     /gene_synonym="AF"
                     /gene_synonym="AF-1"
                     /gene_synonym="ASF"
                     /gene_synonym="MCB1"
                     /gene_synonym="pUB-R5"
                     /gene_synonym="Rpn10"
                     /gene_synonym="S5A"
                     /db_xref="GeneID:5710"
                     /db_xref="HGNC:HGNC:9561"
                     /db_xref="MIM:601648"
     CDS             27..1160
                     /gene="PSMD4"
                     /gene_synonym="AF"
                     /gene_synonym="AF-1"
                     /gene_synonym="ASF"
                     /gene_synonym="MCB1"
                     /gene_synonym="pUB-R5"
                     /gene_synonym="Rpn10"
                     /gene_synonym="S5A"
                     /codon_start=1
                     /product="proteasome (prosome, macropain) 26S subunit,
                     non-ATPase, 4"
                     /protein_id="AAH72008.1"
                     /db_xref="GeneID:5710"
                     /db_xref="HGNC:HGNC:9561"
                     /db_xref="MIM:601648"
                     /translation="MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSN
                     PENNVGLITLANDCEVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQG
                     KNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTL
                     NGKDGTGSHLVTVPPGPSLADALISSPILAGEGGAMLGLGASDFEFGVDPSADPELAL
                     ALRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLP
                     DLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEF
                     LQSVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKK"
BASE COUNT          352 a          296 c          383 g          265 t
ORIGIN      
        1 cggtcgggag ggaggaaggt ggcaagatgg tgttggaaag cactatggtg tgtgtggaca
       61 acagtgagta tatgcggaat ggagacttct tacccaccag gctgcaggcc cagcaggatg
      121 ctgtcaacat agtttgtcat tcaaagaccc gcagcaaccc tgagaacaac gtgggcctta
      181 tcacactggc taatgactgt gaagtgctga ccacactcac cccagacact ggccgtatcc
      241 tgtccaagct acatactgtc caacccaagg gcaagatcac cttctgcacg ggcatccgcg
      301 tggcccatct ggctctgaag caccgacaag gcaagaatca caagatgcgc atcattgcct
      361 ttgtgggaag cccagtggag gacaatgaga aggatctggt gaaactggct aaacgcctca
      421 agaaggagaa agtaaatgtt gacattatca attttgggga agaggaggtg aacacagaaa
      481 agctgacagc ctttgtaaac acgttgaatg gcaaagatgg aaccggttct catctggtga
      541 cagtgcctcc tgggcccagt ttggctgatg ctctcatcag ttctccgatt ttggctggtg
      601 aaggtggtgc catgctgggt cttggtgcca gtgactttga atttggagta gatcccagtg
      661 ctgatcctga gctggccttg gcccttcgtg tatctatgga agagcagcgg cagcggcagg
      721 aggaggaggc ccggcgggca gctgcagctt ctgctgctga ggccgggatt gctacgactg
      781 ggactgaaga ctcagacgat gccctgctga agatgaccat cagccagcaa gagtttggcc
      841 gcactgggct tcctgaccta agcagtatga ctgaggaaga gcagattgct tatgccatgc
      901 agatgtccct gcagggagca gagtttggcc aggcggaatc agcagacatt gatgccagct
      961 cagctatgga cacatctgag ccagccaagg aggaggatga ttacgacgtg atgcaggacc
     1021 ccgagttcct tcagagtgtc ctagagaacc tcccaggtgt ggatcccaac aatgaagcca
     1081 ttcgaaatgc tatgggctcc ctggcctccc aggccaccaa ggacggcaag aaggacaaga
     1141 aggaggaaga caagaagtga gactggaggg aaagggtagc tgagtctgct taggggactg
     1201 catgggaagc acggaatata gggttagatg tgtgttatct gtaaccatta cagcctaaat
     1261 aaagcttggc aacttttaaa aaaaaaaaaa aaaaaa
//