LOCUS BC071997 681 bp mRNA linear HUM 20-MAY-2005 DEFINITION Homo sapiens activating transcription factor 6, mRNA (cDNA clone IMAGE:6379669), complete cds. ACCESSION BC071997 VERSION BC071997.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 681) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 681) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 58 Row: m Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6671584 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..681 /db_xref="H-InvDB:HIT000264803" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6379669" /tissue_type="Pancreas, epithelioid carcinoma" /clone_lib="NIH_MGC_42" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..681 /gene="ATF6" /db_xref="GeneID:22926" /db_xref="MIM:605537" CDS 20..628 /gene="ATF6" /codon_start=1 /product="ATF6 protein" /protein_id="AAH71997.1" /db_xref="GeneID:22926" /db_xref="MIM:605537" /translation="MGEPAGVAGTMESPFSPGLFHRLDEDWDSALFAELGYFTDTDEL QLEAANETYENNFDNLDFDLDLVPWESDIWDINNQICTVKDIKAEPQPLSPASSSYSV SSPRSVDSYSSTQHVPEELDLSSSSQMSPLSLYGENSNSLSSAEPLKEDKPVTGPRNK TENGLTPKKKIQVNSKPSIQPKPLLLPAAPKTQTISSIPPQT" BASE COUNT 225 a 148 c 135 g 173 t ORIGIN 1 gggagaagga acttgtgaaa tgggggagcc ggctggggtt gccggcacca tggagtcacc 61 ttttagcccg ggactctttc acaggctgga tgaagattgg gattctgctc tctttgctga 121 actcggttat ttcacagaca ctgatgagct gcaattggaa gcagcaaatg agacgtatga 181 aaacaatttt gataatcttg attttgattt ggatttggtg ccttgggagt cagacatttg 241 ggacatcaac aaccaaatct gtacagttaa agatattaag gcagaacctc agccactttc 301 tccagcctcc tcaagttatt cagtctcgtc tcctcggtca gtggactctt attcttcaac 361 tcagcatgtt cctgaggagt tggatttgtc ttctagttct cagatgtctc ccctttcctt 421 atatggtgaa aactctaata gtctctcttc agcggagcca ctgaaggaag ataagcctgt 481 cactggtcct aggaacaaga ctgaaaatgg actgactcca aagaaaaaaa ttcaggtgaa 541 ttcaaaacct tcaattcagc ccaagccttt attgcttcca gcagcaccca agactcaaac 601 aatctccagc attccccctc aaacctaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 661 aaaaaaaaaa aaaaaaaaaa a //