LOCUS BC071989 2328 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein phosphatase 1F (PP2C domain containing), mRNA
(cDNA clone MGC:88689 IMAGE:5421075), complete cds.
ACCESSION BC071989
VERSION BC071989.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2328)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2328)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29826333.
FEATURES Location/Qualifiers
source 1..2328
/db_xref="H-InvDB:HIT000264795"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88689 IMAGE:5421075"
/tissue_type="Pancreas, ductal carcinoma"
/clone_lib="NIH_MGC_110"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2328
/gene="PPM1F"
/gene_synonym="CaMKPase"
/gene_synonym="FEM-2"
/gene_synonym="hFEM-2"
/gene_synonym="KIAA0015"
/gene_synonym="POPX2"
/db_xref="GeneID:9647"
/db_xref="HGNC:HGNC:19388"
CDS 93..1454
/gene="PPM1F"
/gene_synonym="CaMKPase"
/gene_synonym="FEM-2"
/gene_synonym="hFEM-2"
/gene_synonym="KIAA0015"
/gene_synonym="POPX2"
/codon_start=1
/product="protein phosphatase 1F (PP2C domain containing)"
/protein_id="AAH71989.1"
/db_xref="GeneID:9647"
/db_xref="HGNC:HGNC:19388"
/translation="MSSGAPQKSSPMASGAEETPGFLDTLLQDFPALLNPEDPLPWKA
PGTVLSQEEVEGELAELAMGFLGSRKAPPPLAAALAHEAVSQLLQTDLSEFRKLPREE
EEEEEDDDEEKAPVTLLDAQSLAQSFFNRLWEVAGQWQKQVPLAARASQRQWLVSIHA
IRNTRRKMEDRHVSLPSFNQLFGLSDPVNRAYFAVFDGHGGVDAARYAAVHVHTNAAR
QPELPTDPEGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQV
ILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGDVFQKP
YVSGEADAASRALTGSEDYLLLACDGFFDVVPHQEVVGLVQSHLTRQQGSGLRVAEEL
VAAARERGSHDNITVMVVFLRDPQELLEGGNQGEGDPQAEGRRQDLPSSLPEPETQAP
PRS"
BASE COUNT 477 a 698 c 713 g 440 t
ORIGIN
1 gaggagacag ctgaggcccg cggagaccag ggggtgaagc ctggagaccc tcttgccctg
61 gcctagctgc aggcccccgg gatgctttgg gcatgtcctc tggagcccca cagaagagca
121 gcccaatggc cagtggagct gaggagaccc caggcttcct ggacacgctc ctgcaagact
181 tcccagccct gctgaaccca gaggaccctc tgccatggaa ggccccaggg acggtgctca
241 gccaggagga ggtggagggc gagctggctg agctggccat gggctttctg ggcagcagga
301 aggccccgcc accacttgct gctgctctgg cccacgaagc agtttcacag ctgctacaga
361 cagacctttc cgaattcagg aagttgccca gggaggaaga agaagaggag gaggacgatg
421 acgaggaaaa ggcccctgtg accttgctgg atgcccaaag cctggcacag agtttcttta
481 accgcctttg ggaagtcgcc ggccagtggc agaagcaggt gccattggct gcccgggcct
541 cacagcggca gtggctggtc tccatccacg ccatccggaa cactcgccgc aagatggagg
601 accggcacgt gtccctccct tccttcaacc agctcttcgg cttgtctgac cctgtgaacc
661 gcgcctactt tgctgtgttt gatggtcacg gaggcgtgga tgctgcgagg tacgccgctg
721 tccacgtgca caccaacgct gcccgccagc cagagctgcc cacagaccct gagggagccc
781 tcagagaagc cttccggcgc accgaccaga tgtttctcag gaaagccaag cgagagcggc
841 tgcagagcgg caccacaggt gtgtgtgcgc tcattgcagg agcgaccctg cacgtcgcct
901 ggctcgggga ttcccaggtc attttggtac agcagggaca ggtggtgaag ctgatggagc
961 cacacagacc agaacggcag gatgagaagg cgcgcattga agcattgggt ggctttgtgt
1021 ctcacatgga ctgctggaga gtcaacggga ccctggccgt ctccagagcc atcggggatg
1081 tcttccagaa gccctacgtg tctggggagg ccgatgcagc ttcccgggcg ctgacgggct
1141 ccgaggacta cctgctgctt gcctgtgatg gcttctttga cgtcgtaccc caccaggaag
1201 ttgttggcct ggtccagagc cacctgacca ggcagcaggg cagcgggctc cgtgtcgccg
1261 aggagctggt ggctgcggcc cgggagcggg gctcccacga caacatcacg gtcatggtgg
1321 tcttcctcag ggacccccaa gagctgctgg agggcgggaa ccagggagaa ggggaccccc
1381 aggcagaagg gaggaggcag gacttgccct ccagccttcc agaacctgag acccaggctc
1441 caccaagaag ctaggtggtt tccaggcccc tgccctcccc ttcctcccat ccttgtcctt
1501 ctctccctca gaagcctcag gacccaacag gtggcaggca gtggacaggg tgcccgcccc
1561 acagtgcttt ccccagcacc ccagagccag tcgggacacc ccccgcagcc cgtcctggtg
1621 gctgtggaac tgcactgggt ggcgggcaga tggtggaagg cagcttagga gacctcacca
1681 aagagaagat ggaccggctc ttgctcccag ctcctattag gcccggggtg ggaccagagg
1741 tcataggtgc ccaacggcag ccaaaccaaa gacactggtg tgcatggggc agcatggttg
1801 tgcacgtggg accctggggc ggacccagga gccaaactct tgaagcaccc cctgggtcag
1861 gcccagcagc ggagtggcca gccccagttt cccattgctc ctctctgcgg ccagggccag
1921 gtgggttcat atttacagat atgcccagcc agtcctggtc ggccacacca gtgtcccaaa
1981 gaggagagcg cagcagagcc aggggtctgt tctgtagcag ccacccccct gcccccactc
2041 cagggcagcc atgatgtgct tgggcccacc agggccttcc gggctgctct cttccctgag
2101 cccggaaccg gcgacgcaca tgtgtctttt gttggtgtgt ttgttttttt ccagggaggt
2161 ctaattccga agcagtattc caggttttct ctttgtttta tcagtgccaa gatgacctgt
2221 tgtgtcatat aatttaagca gagcttagca tttattttat tctttagaaa acttaagtat
2281 ttactttttt aaagctattt ttcaaggaaa aaaaaaaaaa aaaaaaaa
//